| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2541 |
|---|
| Symbol | |
|---|
| ID | 4665256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2790537 |
|---|
| End bp | 2791178 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639823745 |
|---|
| Product | (Acyl-carrier-protein) phosphodiesterase |
|---|
| Protein accession | YP_970888 |
|---|
| Protein GI | 120611210 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0403619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0844019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGC TGCACATCGA TTCCGCCATC ACCGGCAACG CATCCGTTTC GCGCCAGCTG
ACCGCCAGGA CCGTGGCCGC CTGGGTGGCA GCCCATCCCG GCACCGAGGT GCACTACCTC
GATCTCGTGG CGCAGGCTCC GGGCCATTTC ACCATGGACG CGATGGCGCC ACGCACGGGG
CAGACCGACG GGCTGAGCGA AGCGCAGCAG CGCGAAAACG CCGTGTCCGA AACGCTGGTG
AGCCAGTTCC TCGCGGCCGA CGTGGTCGTG GTCGGCGCAC CCTTCTACAA CTTCGGCATC
CCCACGCAGC TCAAGGCCTG GATCGACCGC ATCGCCCAGC CCGGACGCAC GTTCCGCTAC
GGCGCCAGCG GTCCCGAAGG CCTGGCGAAG GGCAAGACGG TGATCGTGGT CTCGTCGCGC
GGCGGCGTGT ATTCCACGAG CGATGCCGGC CGGGCGCTGG AACACCAGGA GAGCTACCTG
CAGACGGTGT TCGGTTTCTT CGGCATCACC GATGTGCGCT TCGTGCGTGC CGAAGGCGTG
GCCATGGGGC CGGACGCCCG CGCCCAGGCG CTGGCGAGCG CCGATGCCGA CATCCGGGCG
CATGCCGCGG CACCGGCCAC CGCGCTGGCC GAAGCCGCCT GA
|
|---|
| Protein sequence | MQLLHIDSAI TGNASVSRQL TARTVAAWVA AHPGTEVHYL DLVAQAPGHF TMDAMAPRTG
QTDGLSEAQQ RENAVSETLV SQFLAADVVV VGAPFYNFGI PTQLKAWIDR IAQPGRTFRY
GASGPEGLAK GKTVIVVSSR GGVYSTSDAG RALEHQESYL QTVFGFFGIT DVRFVRAEGV
AMGPDARAQA LASADADIRA HAAAPATALA EAA
|
|---|
| |