| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2539 |
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| Symbol | |
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| ID | 4667300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2788959 |
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| End bp | 2789804 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639823743 |
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| Product | YaeC family lipoprotein |
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| Protein accession | YP_970886 |
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| Protein GI | 120611208 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00124943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0921723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGATAC GATCCGTCTC CACACATTTC GAATGGAAAG TCACCCCCGT GAACAAGCGT
TTTCTTCTCC GCTCCCTCGC TGCCTCGTCG ATCGCCCTGC TGCTGGCCCC TGGCGCCATG
GCCCAGGACA AGCCGATCAA GGTCGGCGTG ACCGCCGGCC CCCATGCGCA GATCTTCGAG
CAGGTCAAGA AAGTGGCCGA GAAGGACGGC CTGAAGGTCC AGATCGTCGA ATTCAGCGAC
TACGTGCAGC CGAACGCGGC ACTGGCGGCC GGTGACCTCG ATGCCAACAG CTACCAGCAC
AAGCCCTACC TCGACGCCCA GGTGAAGGAC CGCGGCTACA AGCTGGTGTC CGCGGGCTAC
ACGGTCAACT TCCCCATCGG CCTGTATTCG AAGAAGGTCA GGAAGCTCGA GGACCTCAAG
GAGGGCGCGC GTTTCGGCAT TCCCAACGAC CCGACCAACG GCGGCCGCGT GCTGCTGGTG
CTGCAGGACA AGGGCCTCGT CAAGCTCAAG GACGGCGCCG GCCTCAAGGC CACGCCGCTG
GACGTGACCT CCAACCCCAG GAAGCTCAAG TTCGTGGAGC TGGACGCCGC CCAGCTGGCC
CGTTCGCTGG ACGATCTCGA TGCCGCCGCG ATCAACACCA ATTTCGCGCT GTCCGCGGGC
CTCAATCCCA AGACCGACGC CATCGCCCAG GAAAGCGCCA AGAGCCCTTA CGTGAACATC
GTCGCCGTGC GCGAGGCCGA CAAGGACAAG CCCTGGGTGG CCAAGCTGGT GAAGGCCTAC
CACTCGGACG AGGTCCGCCA GTACATCGAA ACGCAGTTCA AGGGCGCGGT GCTCGCCGGC
TGGTGA
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| Protein sequence | MPIRSVSTHF EWKVTPVNKR FLLRSLAASS IALLLAPGAM AQDKPIKVGV TAGPHAQIFE
QVKKVAEKDG LKVQIVEFSD YVQPNAALAA GDLDANSYQH KPYLDAQVKD RGYKLVSAGY
TVNFPIGLYS KKVRKLEDLK EGARFGIPND PTNGGRVLLV LQDKGLVKLK DGAGLKATPL
DVTSNPRKLK FVELDAAQLA RSLDDLDAAA INTNFALSAG LNPKTDAIAQ ESAKSPYVNI
VAVREADKDK PWVAKLVKAY HSDEVRQYIE TQFKGAVLAG W
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