Gene Aave_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2532 
Symbol 
ID4667177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2779982 
End bp2780470 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content73% 
IMG OID639823736 
Productprotein tyrosine phosphatase 
Protein accessionYP_970879 
Protein GI120611201 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.513089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACG CCAACCACGC CCCCGTGCGC ATCCTCATGG TCTGCATGGG GAACATCTGC 
CGCAGCCCCA CGGCCCACGG CGTGCTCGAG ACAATGGCCG CGGACGCGGG CCTGGACGGC
AGGATCGAGG TGGACTCCGC CGGCACGCAC GACTACCACG TGGGCGAGCC GCCCGACGAG
CGCGCCCAGG CCCATGCGCG GCGCAGGGGC TATGACCTGT CAGCCCAGCG CGCCCGCCAC
CTGGGCCTCC AGGACTTCGA GGACTTCGAC CTCGTGCTGG TCATGGACGC CCGCAACGAG
GCCGCGGCGC GCGCACTGTG CCCGCCATCG CGACGGGGCC GCCTGCACCG ACTGACGGAT
TTCCGCCAGG CCCTGCCGGC GCACGAGGTG CCGGATCCGT ACTACGGCGG AGCCGACGGC
TTCGAGCACG TGCTGGACGT GGTGGAGGAT GCATGCGCGG GCCTGCTGGC CGCGCTGCGC
GCGGCATGA
 
Protein sequence
MAHANHAPVR ILMVCMGNIC RSPTAHGVLE TMAADAGLDG RIEVDSAGTH DYHVGEPPDE 
RAQAHARRRG YDLSAQRARH LGLQDFEDFD LVLVMDARNE AAARALCPPS RRGRLHRLTD
FRQALPAHEV PDPYYGGADG FEHVLDVVED ACAGLLAALR AA