| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2456 |
|---|
| Symbol | |
|---|
| ID | 4669514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2678701 |
|---|
| End bp | 2679393 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823661 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_970805 |
|---|
| Protein GI | 120611127 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.485153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCGCACCCCT TTCCCAAGAT GAACTCAAAG CCCTGGTGGG CCAGGCCGCG
CTGAAATACG TGGTGCCCGG CGACATCGTC GGCGTCGGCA CGGGCTCGAC GGTGAACCAG
TTCATCCAGG CACTGGGTTC GATGAAGGAC CGCATCCGGG GCGCGGTGTC GAGTTCCGAG
GCCAGCACGC AGCGGCTGCG TGCGCTGGGC ATTCCGGTCT TCGACGCCAA CGAGGTGGAG
TCCCTGTCCG TCTATATCGA TGGCGCGGAC GAGATCGATC CGCGAGGCCA CATGGTCAAG
GGCGGTGGCG CTGCACTCAC GCGCGAGAAG ATCGTGGCGG CCCTGGCCCG GCAGTTCGTA
TGCATCGCCG ACGTCTCCAA GCTGGTGGAG ACGCTGGGCC GGTTTCCGCT TCCGGTCGAG
GTGATTCCCA TGGCGGCGCA GCAGATCGCG CGCCGGTTCG CCACGCGGGG CGGGCAGGCG
GTGTTGCGCC GGGGGGCGGA CGGACAGCCG CTGGTCACGG ACAACCAGCA GTACATCCTC
GACGTGAAGG GCCTCTCGAT CCAGGATCCG CTGGCGTTCG AGTCGGAGGT CAGCCAGTGG
CCGGGCGTGG TGACGGTGGG CGTCTTCGCC CATCAGAAGG CCGACGTGGC GCTGATCGGT
GCGCCGGAGG GTGTCCGGAC TTTCACGTAC TGA
|
|---|
| Protein sequence | MTTPAPLSQD ELKALVGQAA LKYVVPGDIV GVGTGSTVNQ FIQALGSMKD RIRGAVSSSE
ASTQRLRALG IPVFDANEVE SLSVYIDGAD EIDPRGHMVK GGGAALTREK IVAALARQFV
CIADVSKLVE TLGRFPLPVE VIPMAAQQIA RRFATRGGQA VLRRGADGQP LVTDNQQYIL
DVKGLSIQDP LAFESEVSQW PGVVTVGVFA HQKADVALIG APEGVRTFTY
|
|---|
| |