Gene Aave_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2444 
Symbol 
ID4667812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2669214 
End bp2669612 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID639823647 
ProductFeS cluster assembly scaffold IscU 
Protein accessionYP_970793 
Protein GI120611115 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.463921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACT CCGACAAGGT CATCGACCAT TACGAAAACC CCCGCAACGT GGGTTCGTTC 
GACAAGAGCG ACGATTCCGT GGGCACCGGC ATGGTGGGCG CTCCCGCCTG CGGCGACGTG
ATGAAGCTGC AGATCAAGGT GAACCCGGAA ACCGGTGTGA TCGAGGACGC ACGGTTCAAG
ACGTATGGCT GCGGCTCGGC CATCGCTTCC TCGTCCCTGG TCACCGAATG GGTCAAGGGC
AAGACGCTGG ACGAGGCGGC GGCGCTCAAG AACGCCGAGA TCGCCCAGGA ACTGGCTCTG
CCGCCGGTCA AGATCCATTG CTCCATCCTG GCCGAGGATG CGATCAAGGC CGCCGTGCAG
GACTACAAGG CCAAGCACTC GGCCCTGGCG GGAGCCTGA
 
Protein sequence
MAYSDKVIDH YENPRNVGSF DKSDDSVGTG MVGAPACGDV MKLQIKVNPE TGVIEDARFK 
TYGCGSAIAS SSLVTEWVKG KTLDEAAALK NAEIAQELAL PPVKIHCSIL AEDAIKAAVQ
DYKAKHSALA GA