Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2309 |
Symbol | |
ID | 4669108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2535526 |
End bp | 2535999 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823513 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_970660 |
Protein GI | 120610982 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00293447 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCTGG ACACGATCGA TCTGCGCATC CTGGCCGAAC TGCAGGCCGA CGGCTCGCTC TCCAATGTGG AGCTGGCGCG GCGCGTGCAT CTTTCGCCCT CGCCCTGCCT CGCGCGCGTC AAGGCGCTGG AGGCCTCGGG GGTGATTGCG CGCTACGTCG CCCTGGCGAA CCCGGCCGTG CTGGGCCTGG GGCTGAACGT GTTCATCAGC ATCAGCCTGA AATCGCAGGC CAAGGAGGCA CTGGCGCAGT TCGAGCGTCG CATCGCCGAG CATGACGAGG TCATGGAGTG CTACCTGATG AGCGGCGACT CGGACTACCT GATCCGCGTG GCCGTCGCCG ACATCGGCGC TCTGGAGCGC TTCATCCTGG AGCAGCTCAC GCCCATTCCG GGCATCGAGA AGATCCGCTC CAGCTTCGCG CTCAAGCAGG TGCGTTACAA GACCGCCCTG CCGCTTCCAC TGCCGCCCGC GTGA
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Protein sequence | MKLDTIDLRI LAELQADGSL SNVELARRVH LSPSPCLARV KALEASGVIA RYVALANPAV LGLGLNVFIS ISLKSQAKEA LAQFERRIAE HDEVMECYLM SGDSDYLIRV AVADIGALER FILEQLTPIP GIEKIRSSFA LKQVRYKTAL PLPLPPA
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