| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2285 |
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| Symbol | |
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| ID | 4667458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2516317 |
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| End bp | 2517684 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639823490 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_970637 |
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| Protein GI | 120610959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00827549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000379074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGCGC CGGCGGCGGA TTCCGGTCGG CGGGGCACGC GAAGCGGTAG CATGCGGGCC
GTGCCTGTTC CTCCGTCCCC CCAGCCCTCC CCCGCCCCGT CCGTCCCGGC GCCCCGCTCC
TCCAGCATCT ACCAGCATCC CGGCTTTCTC GCGTTCATCG TGGCGCGGGT GGCCGCCATG
TTCGCCACGC AGGTGCAGGC GGTGGTGGTG GCCTGGCAGG TGTACGACCT GACCCGCGAA
CCCCTGGCGC TGGCCTGTGT GGGGCTGGCG CAGTTCCTGC CCATGCTGGC GCTGCTGCTG
CCCGCAGGCG ACCTGATCGA CCGCGTGCAG CGCAAGCGCA TTCTTTGCGC GAGCTGGGCC
GTGGGCGCCG TGTGCAGCGC GGCGCTGTGG TGGCTCGCCG GGCACGGCGC CGCGGGGGTG
ACGGGCATCT ATGCGGTGCT GGTGCTGTTC GGCGCCTCGC GCGCGTTCTC GGCCCCTGCG
CTGCAGAGCC TGCTGCCGCA GGTGGTGCCG CGGGAGCGGC TGGCCTCGGC CATCGCAGCC
AATTCCATGC TGATGCGCAC GGCGGCCATC GCCGGTCCGT TCCTGGGTGG CCTGCTGTAC
GCGGCCGGGG GTGGCGAGCT GACGTATGCC GTGTGCCTGG TGGCGTTCGC CGTGGGGGCC
GCGCTGATGC TGCGGGTGCC GGTGGCGCAC GCGACCCCGC TGGGACCGGT GCTGGGCACG
ATGCGCGAGC GCTTCGGCGA GGGCATCCGC TTCATCCGGT CGCGGCCCAT CATCCTGGGG
ACAATTTCGC TGGACCTGTT CGCCGTGCTG CTGGGCGGCG TGATCGCGCT GCTGCCCATC
TACGCGCACG AGGTGCTGCA CGTGGGGCCG GAAGGCCTGG GCGCGCTGCG CAGCGCCATG
GCCATGGGCG AGGTGGGCAT GGGCTTCTAC CTGAGCCTGC GGCCGTTCAA CCGCCGGGTG
GGCGCGACGA TGTTCATCGC GGTCGCCGTG TTCGGCGTGG CCAACCTGGT GTTCGCGTTC
TCGACCGTGT TCTGGCTGTC GTTCGCGGCG CTGGTGGTCG CGGGCGCGGC GGACATGGTG
AGCGTGTACA TCCGCGGTTC GCTGGTGCAA TTCTCCACGC CCGACGCCAT GCGCGGCCGG
GTGAGCGCGG TCAACATGCT GTTCATCGGC TCATCCAATG AACTCGGCGA ATTCCGCGCC
GGCACCAGCG CTGCCTGGCT GGGCACCGTG CCCGCGGCCG TGGTGGGCGG CCTGTGCACG
CTCGGAGTGG TGGGGGCTTG GGCCTGGATG TTCAAGCCGT TGCGGCGGGT GGACCGGTTC
GAAGAAGCAT CGCCCCGGCC GGGCGCGGAG CCACCGCGTC CCCATTGA
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| Protein sequence | MAAPAADSGR RGTRSGSMRA VPVPPSPQPS PAPSVPAPRS SSIYQHPGFL AFIVARVAAM
FATQVQAVVV AWQVYDLTRE PLALACVGLA QFLPMLALLL PAGDLIDRVQ RKRILCASWA
VGAVCSAALW WLAGHGAAGV TGIYAVLVLF GASRAFSAPA LQSLLPQVVP RERLASAIAA
NSMLMRTAAI AGPFLGGLLY AAGGGELTYA VCLVAFAVGA ALMLRVPVAH ATPLGPVLGT
MRERFGEGIR FIRSRPIILG TISLDLFAVL LGGVIALLPI YAHEVLHVGP EGLGALRSAM
AMGEVGMGFY LSLRPFNRRV GATMFIAVAV FGVANLVFAF STVFWLSFAA LVVAGAADMV
SVYIRGSLVQ FSTPDAMRGR VSAVNMLFIG SSNELGEFRA GTSAAWLGTV PAAVVGGLCT
LGVVGAWAWM FKPLRRVDRF EEASPRPGAE PPRPH
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