| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2278 |
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| Symbol | |
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| ID | 4666585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2507174 |
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| End bp | 2508007 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639823483 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_970630 |
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| Protein GI | 120610952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0554113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000285246 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCTTC CGAACGCCCC CCGCCATCCG CCCCTGGCCA TCCTCCGGCA GGACGACGAC
CTCGTCGCCG TGTACAAGCC CGCCGGCTGG CTCGTGCACC GCACGGGCCT GGACGCGGGC
GAGACCCGCT TCGTGATGCA GGCGCTGCGC GACCAGCTCG GCCGCCGGGT GTACCCGGTG
CACCGGCTCG ACAAGGGCAC CTGCGGAGTG CTGGTGATGG GGCTGCACGC GGAGGCAGCC
CGCGCGCTGT CGCAGGCCTT CGAGCAGCAC CGGGTGGACA AGCGCTACCT GGCCCTGGTG
CGCGGCCATG CACCGGACCG GGTGCAGGTG GACCATGCCC TGCGCCCGGA CGATGCGCCG
CCCGATGCCG CCGTGCAGCC GGCCCGCACG GCGCTGCGCT GCCTGGCGCG GCTGGAGCTG
CCCGAGGCCA GCGATGCGCG CTTCGCCACC ACGCGGGCCT CGCTGGTGGA AGCCCTGCCG
GAAACCGGCC GCCGCCACCA GATCCGCCGG CACCTCAAGC ACATCGCCCA TCCGATCCTG
GGCGACGCCA CCCATGGCAA GGGCCCGCTG AACCGCTGGT GGGCGCAGCG GCTGGGTCTG
CAGCGGCTCT GGCTGCACGC CTGGCGGCTG GCGCTGCCGC ATCCGGCGAC GGGCGAGACG
GTGGTGGTGG ACAGCGGCCT GCGGGGCGGG CCGCTGCCCG GCACGACGGC TGCGCCGGGC
GGGGCGGGCC CGGCGGAGAT GCCGGCGGCC GCGCCCGACC TGCACGACTG GCAGGCGCGC
GTCCTCAGCC TCGACTGGGT CCCCCGCGGC GATGCAGCCG CCCCGGGACG CTGA
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| Protein sequence | MPLPNAPRHP PLAILRQDDD LVAVYKPAGW LVHRTGLDAG ETRFVMQALR DQLGRRVYPV
HRLDKGTCGV LVMGLHAEAA RALSQAFEQH RVDKRYLALV RGHAPDRVQV DHALRPDDAP
PDAAVQPART ALRCLARLEL PEASDARFAT TRASLVEALP ETGRRHQIRR HLKHIAHPIL
GDATHGKGPL NRWWAQRLGL QRLWLHAWRL ALPHPATGET VVVDSGLRGG PLPGTTAAPG
GAGPAEMPAA APDLHDWQAR VLSLDWVPRG DAAAPGR
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