Gene Aave_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2274 
Symbol 
ID4665623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2503801 
End bp2505036 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content74% 
IMG OID639823479 
Productmajor facilitator superfamily transporter 
Protein accessionYP_970626 
Protein GI120610948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.670451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.83306e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATCCA GTTCCCCCTC CTCTCCCGCG TCCGGCGCGC TGCATGCCCA GGCTCCGGCC 
GGACTGTCCA CCCCCGTCCT GCTGCTCATG GCCACGGCCT GCGGCCTGTG CGCGGGAGCC
AACTATTTCA ACCAGCCCCT GCTGCATTCG ATCGCGGTGC AACTGGGCGT GAGCGAATCC
CGCGCCGCGT TCACCGTGAC GATCTCCCAG GTGTCGTACG CGGCGGGCCT GCTGCTGCTG
GTGCCTCTGG GCGACAAGCT GGAGCGGCGG CGGCTGGTGG TGGCGCTGAT GGCGCTCGCG
GCCTGCGGGC TGTTCCTGAG CGGCTTCGCC GGCAGCTTCG GCGCGCTGGC CGCCGGCACC
CTGATCACGG GGTTGTTCTC CGTGGCGGCG CAGGTGCTGG TGCCGATGGC GGCGGCGCTG
GCGTCGCCAG GGCGCAGCGG CCGCGCTGTG GGCCTGGTGA TGAGCGGCCT GCTGGTGGGC
ATCCTGGCGG CACGCAGCGT GGCGGGGCTG CTGTCGGGCG TGGGCGGATG GAGCCTGGTG
TACCGCGCGG GCGGCGTCGC CATGCTGGCG GTCGCGCTGG CGCTGTGGTT CGTGCTGCCG
GCACTGCGCA CGCCCCACCC GCCGAGCTAT GCGCAGGTGC TGCGCTCGCT GGCCACGCTG
GCGCGGCAGC ACCCGCGGCT GCGCAGCCGG GCACTGCTGG GCGGGCTGTC GTTCGGCTCG
GTGAGCGTGC TGTTTTCCAC GATGGCGCTG ATGCTGGCGG GGCCGTCCCA CCAACTGGGC
GATGCGCAGA TCGGGCTGGT GGGGCTGGCG GGCGTGGCGG GTGCGCTCAT GGCCAACTGG
GCGGGCCGCA TGGCCGACCG CGGCCACGAG CAGGGGACGA CCCGGGCTTC CGTGCTGCTC
GTGCTGGCCA GCTGGGGGGC GCTGTGGCTG GGCGGCACCA GCCTGCCGTG GTTCCTGGCG
GGCGTGCTGG CGATCGACCT GGCGCTGCAG GGCGTGCACA TCAGCAACCA GAACGTGATC
TACGCCCTGG CGCCGCAGGC GCGCTCGCGG CTCAACGCCG TCTATATGAC GACCTACTTC
GCCGGGGCCG CGCTCGGGTC CGCGCTGGGT TCGGCGGCAT GGCAGCACGG CGGCTGGGAC
GCCACCTGCG CCGCCGGCCT GGCGATGGCG GGCGCGAACT GCGCCGCGAT GTGGCACGAC
GCCCGGCTGG CCCGGCAGGC GCCACGCCGC GCATGA
 
Protein sequence
MQSSSPSSPA SGALHAQAPA GLSTPVLLLM ATACGLCAGA NYFNQPLLHS IAVQLGVSES 
RAAFTVTISQ VSYAAGLLLL VPLGDKLERR RLVVALMALA ACGLFLSGFA GSFGALAAGT
LITGLFSVAA QVLVPMAAAL ASPGRSGRAV GLVMSGLLVG ILAARSVAGL LSGVGGWSLV
YRAGGVAMLA VALALWFVLP ALRTPHPPSY AQVLRSLATL ARQHPRLRSR ALLGGLSFGS
VSVLFSTMAL MLAGPSHQLG DAQIGLVGLA GVAGALMANW AGRMADRGHE QGTTRASVLL
VLASWGALWL GGTSLPWFLA GVLAIDLALQ GVHISNQNVI YALAPQARSR LNAVYMTTYF
AGAALGSALG SAAWQHGGWD ATCAAGLAMA GANCAAMWHD ARLARQAPRR A