Gene Aave_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2218 
Symbol 
ID4667471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2438628 
End bp2439977 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content70% 
IMG OID639823423 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_970570 
Protein GI120610892 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.246305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.298182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGCG CGAAGCCTCC CCCGGCCGGG CCTGCCGCGC CTTCGGTGCG CAATGCGCGC 
TACGCGAACG CGGCCGCGGG CCTCAAGAAT CTGCACCAGC TCATCCAGTT GCGCTGGGTG
GCCGCCATCG GCCAGGTGTT CACCATCGAG GTCGCCTACT ACAGCCTCGG GCTGACCCTG
CCGGTGCGCG AGATGCTCAT GGTCGTGGGC TGCCTGGTGC TCTTCAACCT CGTCAGTCTG
GTGCGCTGGC GCACCGGGCA CGGCGTGCGG CAGGTGGAGC TGTTCCTGGC GCTGCTGATC
GACGTGGCGG TGCTCACGGT GCAGCTCTAC CTGAGCGGCG GCACCGGCAA TCCATTCGTC
TTCCTCTACC TGCTGCAGAT CGCGGTCGGC GCGGTGCTGC TGCGCGGCGG CTACATCTGG
TCGATCGTGG CGATCACCAC CGGCTGCTTC GCGGCGCTTT CGCGCTTCAA CCTGCCGCTG
CCCGTGCCCG CGGACCTGCA CCGCGGCCTG TCCAGCCCGT ACCTGCTGGG CCTGCTGGTG
TGCTTCCTGC TCAACGCGAT CCTGGTGGTC ATCTTCATCA CCCGCATCGA GCGCAACCTG
CGCCAGCGCG ATGCGCGGCT GGCGGCGGCG CGCCAGCGCG CCATGGAGGA GGAGCACATC
GTGCGCATGG GCCTGCTGGC CTCGGGCGCG GCCCACGAAC TGGGCACGCC GCTGTCCACC
ATGGCCGTCA TCCTGGGCGA CTGGCGGCAC GACGAGCGGC TGGCCGCCGA CCGCATGCTG
CAGGACGAGA TCGAGGAAAT GCAGGTCCAG GTGCAGCGCT GCAAGAGCAT CGTGAGCGGC
ATCCTGCTGT CGGCCGGCGA AGCGCGCGGC GAAGCGTCCG CGCAGACCAC GGTGCGCACC
TTCGTCGATG CGCTCGCGCG GGACTGGAGG GCCACGCGCG CCATCGCCGC ATTCGACTAC
GACAACCGCT TCGGCGCCGA CACGCCCATG GTGTCGGACA CCATGCTGCA GCAGATGGTT
TTCAATGTGT TGGACAATGC GCGGGACGCC TCGCCCGACT GGGTGGGGAT GGCCGTCGAG
CGCGATGCCG ACCTGCTGCG CATCACCGTG ACCGATGCCG GCCCCGGGTT CGAGCCGGCC
ATCCTTGCGC GGCTCGGCAA GCCCTACCAG TCGAGCAAGG GCCGCGCGGG GGGCGGGCTG
GGCCTGTTCC TGGCCATGAA CGTGGCGCGC ACCCTCGGCG GCAGCGTCAC GGCCCGCAAC
CTGCCGGAGC GCGGCGCCGA GGTCAGCATC CGGCTGCCGC TGTCGGCGGT CGCGCTGCCA
CCCACCGGAC ACATACACCA TGGACGATGA
 
Protein sequence
MPGAKPPPAG PAAPSVRNAR YANAAAGLKN LHQLIQLRWV AAIGQVFTIE VAYYSLGLTL 
PVREMLMVVG CLVLFNLVSL VRWRTGHGVR QVELFLALLI DVAVLTVQLY LSGGTGNPFV
FLYLLQIAVG AVLLRGGYIW SIVAITTGCF AALSRFNLPL PVPADLHRGL SSPYLLGLLV
CFLLNAILVV IFITRIERNL RQRDARLAAA RQRAMEEEHI VRMGLLASGA AHELGTPLST
MAVILGDWRH DERLAADRML QDEIEEMQVQ VQRCKSIVSG ILLSAGEARG EASAQTTVRT
FVDALARDWR ATRAIAAFDY DNRFGADTPM VSDTMLQQMV FNVLDNARDA SPDWVGMAVE
RDADLLRITV TDAGPGFEPA ILARLGKPYQ SSKGRAGGGL GLFLAMNVAR TLGGSVTARN
LPERGAEVSI RLPLSAVALP PTGHIHHGR