Gene Aave_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2217 
Symbol 
ID4667452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2438105 
End bp2438638 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID639823422 
Producttwo component Fis family transcriptional regulator 
Protein accessionYP_970569 
Protein GI120610891 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.524127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATG AACGCCTGCT GCTGATCGTG GAGGACGACG AAGCCCTCGC CAGGACACTG 
GCGCGCTCCT TCGAGCGCCG CGGCTACCGC GTGCTGCATG CCGACAGCCT GGCCGGCGTG
GAGGACCTGC TGGTCCTGCA TGCGCCCGGC TACGCGGTCG TGGACCTCAA GCTCAAGGGC
GAAGCCTCGG GCCTGGCCTG CGTGCAGAAA CTGCACGCCC GCAACCCCGC CATGCGCATC
GTGGTGCTGA CCGGCTTCGC GAGCATCGCC ACGGCGGTGG AAGCGGTGAA GCTCGGCGCA
TGCCATTACC TCGCCAAGCC CTCCAACACC GACGACATCG AAACCGCCTT CGGCCTTTCC
GAAGGCAACA CCGAGGTGGA ACTGACCAAC CGGTCCAGTT CCATCAAGAC CCTGGAGTGG
GAGCGCATCC ACGAGGTGCT GGCCGAGACG GACTTCAACA TCTCCGAGGC CGCGCGCCGC
CTCGGCATGC ATCGCCGCAC GCTCACCCGC AAGCTCGGCA AGCAGCGGGT GTGA
 
Protein sequence
MDDERLLLIV EDDEALARTL ARSFERRGYR VLHADSLAGV EDLLVLHAPG YAVVDLKLKG 
EASGLACVQK LHARNPAMRI VVLTGFASIA TAVEAVKLGA CHYLAKPSNT DDIETAFGLS
EGNTEVELTN RSSSIKTLEW ERIHEVLAET DFNISEAARR LGMHRRTLTR KLGKQRV