Gene Aave_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2122 
Symbol 
ID4666941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2333704 
End bp2334492 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID639823330 
Productexodeoxyribonuclease III 
Protein accessionYP_970477 
Protein GI120610799 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.443475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.589868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCACCTTCAA CGTCAACAGC ATCCGCGCCC GCCTGCCGGC GCTGCTCCAG 
TGGCTGGAGG AATCCCGCCC CGATGTCGCC TGCCTGCAGG AACTCAAGTG CACCGACGAC
GCCTTCCCGG CCGGGGAGAT CCGGGCCGCG GGCTACGGCG CGCTCTGGCA CGGGCAGAAG
GCCTGGAACG GCGTGGCCAT CCTCGCGCGC GGTGCCAATC CCATCGAGGT GCAGCGCGGG
CTGCCCGGCG ACGAAGCCGA CAGCCAGAGC CGCTACCTGG AGGCCGCCGT GGACGGCGTG
CTGGTCGCCT GCCTCTACCT GCCCAACGGC AACCCGGCCC CCGGCCCGAA GTTCGACTAC
AAGCTCGCGT GGCTCGACCG CCTCGCGCGG CGGGCCGGCG TGCTGCGCGA CCGCCCCGAG
CCGGTGGTGC TGGCGGGGGA CTTCAACATC ATTCCCACCG AGCGCGACGT GTACAAACCC
GGGGCCTGGG TGGACGACGC GTTGTTCCGC TCCGAGGTGC GCGATGCCTT CCGCGCCCTG
GTGGACAGCG GCTGGACCGA CGCGCTTCGC GCGGTGCATC CCGACGAGAC GGTCTATACC
TTCTGGGACT ACCTGCGCCA GCGCTTTCAG CGCAACGCCG GCCTGCGTAT CGACCACCTG
CTGCTCAACC CCGCGGCGGC CCACCGCCTG CAGGACGCGG GCGTGGACCG CGAAGTGCGC
GGCCGGCCCC GGCCCAGCGA CCATGCCCCG GCCTGGGCGC TGCTGGCACC GGGGCAGGGC
GGGACCTGA
 
Protein sequence
MKIATFNVNS IRARLPALLQ WLEESRPDVA CLQELKCTDD AFPAGEIRAA GYGALWHGQK 
AWNGVAILAR GANPIEVQRG LPGDEADSQS RYLEAAVDGV LVACLYLPNG NPAPGPKFDY
KLAWLDRLAR RAGVLRDRPE PVVLAGDFNI IPTERDVYKP GAWVDDALFR SEVRDAFRAL
VDSGWTDALR AVHPDETVYT FWDYLRQRFQ RNAGLRIDHL LLNPAAAHRL QDAGVDREVR
GRPRPSDHAP AWALLAPGQG GT