| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2019 |
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| Symbol | |
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| ID | 4669144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2196550 |
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| End bp | 2197089 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823230 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_970377 |
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| Protein GI | 120610699 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00126943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0153183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGGAC TCCTCCAACT GGCCAGGGGC ATGGACTGGG TTTCCACCAG GCTCAGCAAG
ATCGCGGGCT GGGCCGTGCT CGCCGCCGCC CTGATTTCCG CGGGCAACGC CCTGGTGCGC
TACGGGCTGG ATCTCAGCTC CAACGCGTGG CTCGAGATCC AGTGGTACCT CTTCGGCACC
ACCGTGATGC TCGGCGCGCC GGTGGTGCTC AAGCTCAACG AACACGTGCG CGTGGACATC
ATCTACGGCA AGCTGCGCGG CCGCGGGCCG GTCCTCGTCG ATCTGTTCGG CCTCATCTTC
TTCCTGCTGC CCGTGATGGG CCTGCTCACC TGGCTCACGT GGCCGTTCTT CTGGAACATG
TATGTCACCA AGGAGATGTC GGGCAACATC GGCGGCCTGA TCCGCTGGCC CGCGGCGCTG
CTGCTGCCCG TGGGCTTCGG CGCGGTCTTC CTGCAGGGCC TGGCCGAGAT CGTCAAGCGC
GTGGCCTACC TGACGGGGCA CCTGCAGATC AGCACCCATT ACGAGAAGCC GGTGCAGTAA
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| Protein sequence | MTGLLQLARG MDWVSTRLSK IAGWAVLAAA LISAGNALVR YGLDLSSNAW LEIQWYLFGT
TVMLGAPVVL KLNEHVRVDI IYGKLRGRGP VLVDLFGLIF FLLPVMGLLT WLTWPFFWNM
YVTKEMSGNI GGLIRWPAAL LLPVGFGAVF LQGLAEIVKR VAYLTGHLQI STHYEKPVQ
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