| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2016 |
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| Symbol | |
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| ID | 4668943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2192541 |
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| End bp | 2193620 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639823227 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_970374 |
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| Protein GI | 120610696 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0633546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0167782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTC GTTCCATCCT CAAGCACGCT GGCATCGCCG GCGTGCTGGC GGCCGGCGCA
GCCCCCGCTG TGCACGCCCA GGCCAGCATC CGCTGGCGCC TCGCGTCCAG CTTCCCCAAG
TCGCTCGACA CCATCTATGG CACGGCGGAA GTGTTCTCCA AGAAGGTCAG CGAAGCCACC
GGCGGCAAGT TCCAGATCTC CGTGCATGCC GGCGGCGAAC TGATGCCCGC CTTCGGCGTG
GTGGACGGCG TGCAGAACGC CTCCGTCGAG ATGGCGCACA CGGCGCCTTA CTACTACTAC
GGCAAGGACC CGACGTTCTG CCTGGGCTGC GCCGTGCCCT TCGGCCTGAA CGCGCGGCAG
ATGAACGCCT GGATGTACGA GGGCAACGGC CTGAAGCTGA TGCGCGAGTT CTACGCCAAG
TACAACATCA TCAGCTTCCC CGGCGGCAAC ACGGGCGCGC AGATGGGTGG CTGGTTCCGC
AAGGAGATCA AGTCCGTCGC CGACCTCAAG GGCCTGAAGT TCCGCACCAA CCCCTTCGCG
GGCAAGGTGC TCGAGCCCTT CGGCGTGATC CCGCAGTCCA TTCCCGCCGC CGACCTGTAT
CCGGCGCTGG AAAAGGGCAC GATCGATGCG CTGGAATGGG TGGGACCGTA CGACGACCAG
AAGCTGGGCT TCAACAAGGT CGCGCCGTTC TACTACTACC CCGGCTGGTG GGAGGGTGGC
CCGCAACTGG ACTTCTACAT CAACACCAAG GCCTGGGAAG GCCTGCCGGC CGAGTACAAG
GCCGTGGTGG AAGCCGCCGC CTCGCACGCG CACGTCACTA TGCTGTCGAA GTACGACGCG
CGCAACCCCG TGGCGATCAA GCAGCTCGTG GGCTCGGGCA CCAAGCTGCG GCCGTTCACG
CAGGACGTGA TGAACGCGGC GTTCAAGTCG GCGCAGCAGA TCTACGCGGA CCTGAACAAC
ACCAATCCGG AGTGGAAGAA GGTCTATACG GATTACGCCA AGTTCCTGGC GGACGAGAAC
GCGTGGTTCC GGTTCACGGA AGGCACGTTC GATCGATTCA TGCAGGCGCA GAAGCTCTGA
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| Protein sequence | MDRRSILKHA GIAGVLAAGA APAVHAQASI RWRLASSFPK SLDTIYGTAE VFSKKVSEAT
GGKFQISVHA GGELMPAFGV VDGVQNASVE MAHTAPYYYY GKDPTFCLGC AVPFGLNARQ
MNAWMYEGNG LKLMREFYAK YNIISFPGGN TGAQMGGWFR KEIKSVADLK GLKFRTNPFA
GKVLEPFGVI PQSIPAADLY PALEKGTIDA LEWVGPYDDQ KLGFNKVAPF YYYPGWWEGG
PQLDFYINTK AWEGLPAEYK AVVEAAASHA HVTMLSKYDA RNPVAIKQLV GSGTKLRPFT
QDVMNAAFKS AQQIYADLNN TNPEWKKVYT DYAKFLADEN AWFRFTEGTF DRFMQAQKL
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