Gene Aave_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1974 
Symbol 
ID4665131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2144089 
End bp2144607 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content74% 
IMG OID639823184 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_970332 
Protein GI120610654 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.561194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0216747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGT CCCGGGAGCC GGTCCTGGCC GGCATCGGTC TGGGCGCCAA TCTCGGGGAT 
GCCCGGGCCG CGCTGGCCGG GGCCGTGGCC GCGCTGGCCG GACTGCCGTC CACGTGCTTG
CAGGCGGTGT CGTCGCTGTA TGCGAGCGCT CCGGTGGATG CGCAGGGCCC GGATTACCTG
AATGCCGTGG CGCTGGTGTC CACCGGGCTG ACAGCCCCGG CCTTGCTGGA TGCGCTCCTG
GTCATCGAGG CCGATGCGGG GCGAGAGCGC CCCTACCGCA ACGCGCCGCG CACGCTGGAT
CTCGACCTGC TCTTCTATGG CGGCGCGCGC ATCGCATCGC CGCGCCTGCT GGTGCCGCAT
CCGCGTGCGG ACGAGCGGGC CTTCGTGCTG CGGCCCCTGG CGGAAGTGGC GCCGCAGCGG
GTGCCGGCCG CTGCACTCGA ACGCGTGGCA GGCCAGCGCG TGGAAGTGGC CGCCGGACCC
GGCTGGAGCC CTAGTCCACC TTCGCGCCGG ACGCCTTGA
 
Protein sequence
MGVSREPVLA GIGLGANLGD ARAALAGAVA ALAGLPSTCL QAVSSLYASA PVDAQGPDYL 
NAVALVSTGL TAPALLDALL VIEADAGRER PYRNAPRTLD LDLLFYGGAR IASPRLLVPH
PRADERAFVL RPLAEVAPQR VPAAALERVA GQRVEVAAGP GWSPSPPSRR TP