Gene Aave_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1964 
Symbol 
ID4666638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2134404 
End bp2135681 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID639823174 
ProductDNA-directed DNA polymerase 
Protein accessionYP_970322 
Protein GI120610644 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.560205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0220335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCG TGAGCGCATC CCCTGACACG TCCGCGCAGC CGCAGGCCGC GGCCCTTCCC 
GCCGGCGCGG CGGCGGCGTC CCTGCCGCGC CGCATCGCTC ACCTGGACAT GGATGCCTTC
TACGCCTCGG TCGAGCTGCT GCGCTATCCG CAGCTCAAGG GCCTGCCGGC CGTCATCGGC
GGCGGCCGCC GGAGCGAGGA CGAGGCACTC GCCCGGGCCT ATGCCGGCCG CGAGTCCGAG
ATCCCGGTGG AGGCTTTTCC GCTGCTGCGC GACTACGTGG GCCGGGGCGT GATCACCACC
GCCACCTACC CGGCCCGGCA GTTCGGCGTG GGCTCGGCCA TGGGCCTGAT GAAGGCGGCG
CGGCTGTGCC CGCAGGCCAT CCTGCTGCCG GTGGATTTCG CGTCCTACCG GCGCTTCTCG
CGGCAGTTCA AGGACGTGAT CCTCTCCATC GCCCCCGTCA TGGAAGACCG CGGCGTGGAC
GAGGTGTATA TCGACTTCAC CGCGGTGCCC GGGGGCCAGC GCGAGGGCGG GCGGGTGCTC
GCGCGGCTCA TCCAGAAAAG CATCTTCGAG GTCACGGGCC TGACCTGCTC GATCGGCGTC
GCGCCCAACA AGCTCATCGC CAAGATGGCG AGCGAATTCA ACAAGCCCAA CGGCATCTCG
ATCGTGCACG AGGGCGACCT GCAGGCGGCG ATCTGGCCGC TGGCCTGCCG CAAGATCAAC
GGTATCGGCC CCAAGGCCGA CGCCAAACTG CAGTCCTACG GCATCCACAC CATCGGCGAC
CTCGCGGCGC GCCCGCGCGA CTGGCTGGTG CGCACCTTCG GCAAGGCGTA CGGCGCCTGG
CTGCACGAGG CCGCCTGGGG GCGCGACGAC CGGGCCGTGG TGACCGAGAG CGAGCCCGTC
TCCATGAGCC GCGAGACCAC CTTCGACCGC GACCTGCACG CCGTGCGCGA CCGCGCGGAA
CTCGGCCGCA TCTTCACCGA CCTGTGCGAG CGCGTGGCCG AAGACCTGCG CCGCAAGGGC
TACGTGGGCA AGACGATCGG CATCAAGCTG CGCTACGACG ACTTCAGGAT CGCCACGCGC
GACCAGACCA TCGCGGCCTA CACGCGCGAC GCCGCCGCGA TCCGCCGCAC GGCGGGCGAA
TGCCTCAAGC GCGTGCCGCT GGACAAGCGC CTGCGGCTGC TGGGGGTGCG CGTGGGCAAT
CTGCTGACGG ATGAGGAAGC ACGCGAGGCC GAGGCGGCGG CCCGCGTGCC GGAGACGCGG
CGGCTCTTCG ACGACTGA
 
Protein sequence
MRSVSASPDT SAQPQAAALP AGAAAASLPR RIAHLDMDAF YASVELLRYP QLKGLPAVIG 
GGRRSEDEAL ARAYAGRESE IPVEAFPLLR DYVGRGVITT ATYPARQFGV GSAMGLMKAA
RLCPQAILLP VDFASYRRFS RQFKDVILSI APVMEDRGVD EVYIDFTAVP GGQREGGRVL
ARLIQKSIFE VTGLTCSIGV APNKLIAKMA SEFNKPNGIS IVHEGDLQAA IWPLACRKIN
GIGPKADAKL QSYGIHTIGD LAARPRDWLV RTFGKAYGAW LHEAAWGRDD RAVVTESEPV
SMSRETTFDR DLHAVRDRAE LGRIFTDLCE RVAEDLRRKG YVGKTIGIKL RYDDFRIATR
DQTIAAYTRD AAAIRRTAGE CLKRVPLDKR LRLLGVRVGN LLTDEEAREA EAAARVPETR
RLFDD