| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1947 |
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| Symbol | |
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| ID | 4667642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2109347 |
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| End bp | 2110093 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639823157 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_970305 |
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| Protein GI | 120610627 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.298927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00301393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACATCC TCATCGTGGA CGACGAAGCC CTGGCCCGCA GCCGCCTGCG CACGCTGCTG
TCCGACAGCG GCGGGCACAC CCTGGCCGAG GCGGCGAATG CCGCAGAAGC GCTGCAGCTG
CTGCGCGCGC CGGGCGGGCG GCCCTTCGAC GCCGTGCTGC TCGACATCCA CATGCCCGGG
CAGGACGGGC TTTCCCTCGC GCATGTGCTG CGCGCCCTGG CCAGCCCTCC CGCCATCGTT
TTCGTGACGG CGCATGCCGA CCACGCCGTG AGCGCCTTCG AGCTGGACGC GGCGGACTAC
CTCACCAAGC CCGTGCGCGC CGAGCGCCTG CAGCAGGCGC TGGCCAAGGC CCAGCGCGCC
GTCGCCCGGC CCGCGGCGGT CGCTCCCGCT TCGCCGGCCG CACCGGACAC GGAGGCGCTG
CTGATCCAGG ACCGGGGCCG CACCGAACGC GTGCCGCTGG ACGAGGTGGT CTATGTCAAG
GCCGAACTGA AGTACCTCAC CGTCCGCACG GGCACGCGCA GCTACATCCT GGACGGCGCG
CTGAGCGAAC TCGAAGCGCG CTATCCGTCC CGCTTCCTGC GCGTACACCG CAACGCGCTG
GTCGCGCGGC GCGCGCTGCG GGCCATCGAG AAGCACTACG ACCCGGTGGA AGGCGAAGGC
TGGGCCGTGC GCATGCACGG CCTGCCGGAA CTGCTGTCCG TGTCGCGCCG GCAGGTGTCC
GCGGTTCGCG AGGCGCTGGC GGGCTAG
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| Protein sequence | MHILIVDDEA LARSRLRTLL SDSGGHTLAE AANAAEALQL LRAPGGRPFD AVLLDIHMPG
QDGLSLAHVL RALASPPAIV FVTAHADHAV SAFELDAADY LTKPVRAERL QQALAKAQRA
VARPAAVAPA SPAAPDTEAL LIQDRGRTER VPLDEVVYVK AELKYLTVRT GTRSYILDGA
LSELEARYPS RFLRVHRNAL VARRALRAIE KHYDPVEGEG WAVRMHGLPE LLSVSRRQVS
AVREALAG
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