Gene Aave_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1943 
Symbol 
ID4668523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2104418 
End bp2105326 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID639823153 
Productcarboxymethylenebutenolidase 
Protein accessionYP_970301 
Protein GI120610623 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0524201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0241824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCATG ACGACCTCAG GAAAGATTTC GATGCCCTGC TGCCCGGCAA ATCCAGCGAA 
GCCGGTGCCA GCCGCCGCAC CGCCATGCGC GTGGCGCTGG GCGCGGGCTT CGGCGTGGGC
TACGCCGCCG CGGCGATGCC GGTCATGGCG CAGACGGCCA TCCACACGCC GTCCGATGGA
CTGGTGGCAG GCAAGGTCGA GATCGACGTC AACGGCTTCA AGGTGCCGGC CTACCGCGCC
GCGCCCGCCG GCAAGACGGG GCTGCCCGTG GTGCTGGTGA TCCAGGAGAT CTTCGGCGTG
CACGAGTACA TCGCCGACAC CTGCCGCCGC TTCGCGAAGG CGGGCTATCT CGCCATCGCG
CCGGAGATGT TCGTCCGCCA GGGAGACCCC TCGCAGTACA CCGAAATCTC CAGGCTCATG
GGCGAGATCG TCTCCAAGGT GCCCGATGCC CAGGTGCTGG CCGACCTCGA CGCGACCGTG
AAGTGGGCCG GCGACCACGG CGGCGATCTC TCGAAGGTGG GCATCACGGG CTTCTGCTGG
GGCGGGCGCA TCACCTGGCT CTATGCGGCC CACGGCCCGG TCAAGGCCGG CGTGGCATGG
TACGGCCGGC TGGTGGGGCA GGCGGGCGAG CTCACGCCCA AACACCCGGT GGACATCGCT
CCCATCCTCA AGGCGCCGGT GCTCGGCCTC TACGGCGAAA AAGACACCGG AATCCCTCTT
GACACGATTG ATAAGATGAA AGCGGCCCTC AAGAACGGGT CCGCCGCCGC CAAGGCGTCG
GAGTTCGTGG TGTACCCTGA CGCGCCGCAT GCGTTCCATG CCGACTACCG GCCCAGCTAC
CGCAAGGAAG CCGCCGAGGA CGGGTGGAAG CGCGCGCTGG CGTGGTTCAA GGCGCACGGC
GTGGGCTGA
 
Protein sequence
MLHDDLRKDF DALLPGKSSE AGASRRTAMR VALGAGFGVG YAAAAMPVMA QTAIHTPSDG 
LVAGKVEIDV NGFKVPAYRA APAGKTGLPV VLVIQEIFGV HEYIADTCRR FAKAGYLAIA
PEMFVRQGDP SQYTEISRLM GEIVSKVPDA QVLADLDATV KWAGDHGGDL SKVGITGFCW
GGRITWLYAA HGPVKAGVAW YGRLVGQAGE LTPKHPVDIA PILKAPVLGL YGEKDTGIPL
DTIDKMKAAL KNGSAAAKAS EFVVYPDAPH AFHADYRPSY RKEAAEDGWK RALAWFKAHG
VG