| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1907 |
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| Symbol | |
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| ID | 4666951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2064148 |
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| End bp | 2065242 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823116 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_970265 |
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| Protein GI | 120610587 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000309488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCGGCC TGCAAGATCG CCAGCAACTG GCCCGCGACA TCCAGATCGC CCACGACAGC
GGCGCGCGGC TGCACCTGGC CTGTCAGGTC GCCGGTATCG ACGTGCGCAC GCTGCAGCGC
TACAAGGCTG CGGGTGGGCT GGCCCAGGGC GATGCACGGC CTCAGGCGCT GCGCCCCACG
CCAAGCCATG CCTTGACCGA GGCCGAACGC CAGCGGCTGG TGCAGGTGGC CAACGCACCG
CGCTTTGCCG ACGTGCCGCC GGCGCGCATC GTGCCCATGT TGGCCGACGA GGGTGTCTAC
CTGGCCAGCG AATCGAGCTT CGCGCGGGTG CTGCGTGCGC ACGGGCAGAA CGCCCATCGC
GGTCGCGCCC GATCGCCGCA GGCCAGCCGC GCGCCCAGCA CCCATGTGGC CACGGCGCCC
GGCCAGGTGT GGTGCTGGGA CATGACCTAT CTGCCGGCCC GCGTCGCCGG GCGCTGGTTC
CACCTGTACC TGATCATGGA TCTGTACAGC CGCAAGATCG TGGGCTTCGA GGTGCACGAC
AGCGACCAGG CCGAGCATGC CGCACGACTG GTGCGCCGCA CGGCGCTGGC CGAGGGCATC
GCCGCGCGCG CCGACAAGCC AGTGCTGCAC GGCGACAACG GAGCCACGTT GAAGGCCACC
ACGGTGCTGG CCATGCTGCA CTGGTTGGGC GTCAAGCCTT CGTACTCGCG CCCCCGCGTG
AGTGACGACA ACGCCTTCGT GGAAAGCCTG TTCCGTACCG CCAAATACCG CCCCGAGTTC
CCCGCCAGCG GCGGCTTCGA CGATCTGGAC CAGGTACGCC AGTGGGCCAG CGGCTTCGTG
CATTGGTACA ACTGCGAGCA CCGCCACAGC GCGATCGGCT ACGTCACGCC GACGCAGCGC
CATGCCGGGC AGGACCAGGC CATCCTGCAG GCTCGCCATC ACCTTTACAC CCAGGCCCGA
CAGCGCAACC CCGCGCGCTG GTCGGGCAGC ACCCGCAACT GGGCGCCGGT CCAATCGGTC
ACGCTCAACC CTGAGCGCGA CGGCATCTCC AATGCCGCGG CGACCGCATC GAATACGCAG
CCTCGGGCTG CTTGA
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| Protein sequence | MIGLQDRQQL ARDIQIAHDS GARLHLACQV AGIDVRTLQR YKAAGGLAQG DARPQALRPT
PSHALTEAER QRLVQVANAP RFADVPPARI VPMLADEGVY LASESSFARV LRAHGQNAHR
GRARSPQASR APSTHVATAP GQVWCWDMTY LPARVAGRWF HLYLIMDLYS RKIVGFEVHD
SDQAEHAARL VRRTALAEGI AARADKPVLH GDNGATLKAT TVLAMLHWLG VKPSYSRPRV
SDDNAFVESL FRTAKYRPEF PASGGFDDLD QVRQWASGFV HWYNCEHRHS AIGYVTPTQR
HAGQDQAILQ ARHHLYTQAR QRNPARWSGS TRNWAPVQSV TLNPERDGIS NAAATASNTQ
PRAA
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