Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1888 |
Symbol | |
ID | 4668442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2043615 |
End bp | 2044340 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823097 |
Product | NUDIX hydrolase |
Protein accession | YP_970246 |
Protein GI | 120610568 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00118194 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTT CCCCATCCAC CGCGGCCGCA GCCACTGCCG GGCCGCTGAC GGCCCTGCCA GGATTCGATC CCCGGACGGT TCCGGTGCTG GGGACCGACG CCCACCTGCC CGCCGTGCCG GCCGCTGCGT GGGCGCCCGA GGCGCTGCGC CGGCGCTTCG CCGCGCCGCC GTCCTGGACG CCCGACGTGC TGCGCGAGAG GGCCATGACG ACCCGCGCGC CGCGCGATGC GGCCGTGCTG CTGGCGATCA TGCTGCGCGA TGAGCCGACC GTGCTGCTGA CGGAGCGCAC CGCGCATCTG TCCAACCATT CGGGGCAGGT GGCCTTCCCG GGCGGACGCG TCGATCCGGG CGATGCGGAC GCCGCTGCCG CCGCGCTGCG CGAGGCGCGC GAAGAAGTGG GCCTCGACAG CGGCAGGGCG GAGGTGCTGG GCACGCTGCC CGTCTATGCC ACCGGCACGG CCTTCCTCGT CACGCCCGTG GTGGCGCTGG TCCAACCGGA AGGCAGCTTC CAACCCAATC CTTATGAAGT GGCCGATATC TTCGAGGTGC CGCTGGCCTT CCTGCTGGAC CCGTCGAACC ACCGGCGCCA TGCCCTCGAC ATCGGCGGTG CCCTGCGCGA GTGGTTCTCC ATGCCCTACA CCGATCCGGC GACGGGCAAG GACCACTTCA TCTGGGGTGC CACGGCGGGC ATGCTGCGCA ATTTCTACCG CTTCCTGCTG GCCTGA
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Protein sequence | MSSSPSTAAA ATAGPLTALP GFDPRTVPVL GTDAHLPAVP AAAWAPEALR RRFAAPPSWT PDVLRERAMT TRAPRDAAVL LAIMLRDEPT VLLTERTAHL SNHSGQVAFP GGRVDPGDAD AAAAALREAR EEVGLDSGRA EVLGTLPVYA TGTAFLVTPV VALVQPEGSF QPNPYEVADI FEVPLAFLLD PSNHRRHALD IGGALREWFS MPYTDPATGK DHFIWGATAG MLRNFYRFLL A
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