Gene Aave_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1878 
Symbol 
ID4666069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2036681 
End bp2037409 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID639823087 
ProductABC transporter-related protein 
Protein accessionYP_970236 
Protein GI120610558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA AATCCAACAA CGTACTGCTG TCCGTGAAGG GCCTGAAGGT GGCCTACGGC 
GGCATCCAGG CCGTCAAGGG CGTGGACTTC GAGGTGCGCG AGGGCGAGCT CGTCTCCCTC
ATCGGTTCCA ACGGTGCCGG CAAGACCACG ACGATGAAGG CCATCACCGG CACGCTGGCG
ATGAACGACG GCGACATCCA CTACCTGGGC GAGAGCATCC GCGGCAAGGG CGCCTGGGAC
CTCGTGAAGA AGGGTCTGGT GATGGTGCCC GAGGGCCGCG GCGTGTTCGC CCGCATGACC
ATCACCGAGA ACCTGCTGAT GGGCGCCTAC ACGCGCAACG ACAAGGCCGG CATCCAGGCC
GACATCGAGA AGATGTTCAG CATCTTCCCA CGCCTGCGCG AGCGCAAGGA CCAGCTCGCG
GGCACCATGT CCGGCGGCGA GCAGCAGATG CTCGCCATGG GCCGCGCGCT CATGAGCCAG
CCCAAGGTGC TGCTGCTGGA CGAACCCTCC ATGGGCCTGT CTCCCATCAT GGTGGACAAG
ATCTTCGAGG TGGTGCGCGA CGTCTATGCC CTGGGCGTGA CCATCGTGCT GGTCGAGCAG
AACGCCAGCC GCGCGCTGGC CCTGGCCGAC CGCGGCTACG TGATGGAATC CGGCCTGATC
ACCATGACCG GCCCGGGCCA GGACCTGCTG AACGATCCGC GCGTGCGCGC CGCCTACCTG
GGCGAGTGA
 
Protein sequence
MAEKSNNVLL SVKGLKVAYG GIQAVKGVDF EVREGELVSL IGSNGAGKTT TMKAITGTLA 
MNDGDIHYLG ESIRGKGAWD LVKKGLVMVP EGRGVFARMT ITENLLMGAY TRNDKAGIQA
DIEKMFSIFP RLRERKDQLA GTMSGGEQQM LAMGRALMSQ PKVLLLDEPS MGLSPIMVDK
IFEVVRDVYA LGVTIVLVEQ NASRALALAD RGYVMESGLI TMTGPGQDLL NDPRVRAAYL
GE