| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1756 |
|---|
| Symbol | |
|---|
| ID | 4666555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1914927 |
|---|
| End bp | 1915409 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822959 |
|---|
| Product | transcriptional regulator CII, putative |
|---|
| Protein accession | YP_970117 |
|---|
| Protein GI | 120610439 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.812409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTC TCGATGCCCT GCGACGCATG GTCGCCAACT ACCCCGGCGG CCGTGCCGCT
CTGGCCGCAC GCCTCGGCAA GTCCGACGAG GTGCTCCGCA AGGAGCTGAG CGGCTCCAGC
GCCGGCCACA AGATGGGCCT GGCCGATGCG GAGGAGATCG CCACGATGTG CCATGAGGCC
GGCAGCGCCG GGGCTCAGGG GCTCGGAACG GTCTTTTCCT TCGGATCAGG GATGCTCGCG
CTCCCGGTCA TTCATGCCAG CGCGGAGCGC CGTTGCCTGC GCACGGCGAC CTTCGCTGCC
GTCCAAGAAT GCGCTGACGT GTTCACGGCT GTCACCAAGG CTCTGGCGGA TGGGTCGATC
AGCGAGAACG ATCGGCGCAA GGTGCTGCGC GAGGTGGGTG AGGCGGTGGC GGAGATGCAG
GGTGTGGTCG TAGAGCTCAA TGCTCAGTAC GCGGCCGACA CCGCAGGGAG GGCGCCGGCA
TGA
|
|---|
| Protein sequence | MNSLDALRRM VANYPGGRAA LAARLGKSDE VLRKELSGSS AGHKMGLADA EEIATMCHEA
GSAGAQGLGT VFSFGSGMLA LPVIHASAER RCLRTATFAA VQECADVFTA VTKALADGSI
SENDRRKVLR EVGEAVAEMQ GVVVELNAQY AADTAGRAPA
|
|---|
| |