Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1718 |
Symbol | |
ID | 4666624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1877991 |
End bp | 1878941 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639822920 |
Product | hypothetical protein |
Protein accession | YP_970079 |
Protein GI | 120610401 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000662496 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000124796 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTCGAATT CTACGCAAGT CGCGGCCGGC CGCGCAATCA CCGTCCCCTT CCATGGCGCT GACCTGTATG TCGTGGAGAA CAACGGGCAG CCGTACACAC CCATGAAGCC GATCGTCGCG GCCATGGGGC TGGACTGGGG GAGCCAGTTC CGCAAGGTGG CGGCCAACGA GTCGCGCTGG GGTATTGTCA ACTTGACAAT ACCTTCGGCC GGTGGCGAGC AGGCCATGAC TTGCTTGCCT GTGCGGAAGA CGGCGGCATG GCTGACCACC ATCGAGCCGG GCAAGGTCAA GAGCCCCCAA GTCCGCGCCC GCGTCATTCA GTACCAGAAC GAGTGCGATG ACGCTCTCTG GCACTACTGG AACGAGGGCA TCGCTGTCAA CCCGCGGGCG CTGTACTCGG TCAGCCCGGG CGACGTGCTG ACGGGCGAGG AGGCGGAAGC CCTGCGGCTG ATGCTGACCA CGGCGGTTGA CCGGCTTCCG AAGCACAAGC GGGCTGCGGC CATGGTGAAG GGGTGGAGCA AGCTCAAGGC ACACTTCCAT GTGTCGTACA GGCAGATTCC GCGCAGCGAG TTCACTGAGG CGCTGTCTAT CGTAGCGCGG CACACGGCCG AATGGGATCT GGTGGACGAA GCGCCGTCCT CTGGTGCGCT GAACGAGCAG GTTGCCCGAA TGGTGAGGCA GGTGGAAGGG CCAAACGGCA CGCCGGTGGA AGTCTTCATG CCGCTGGTCA ACGCCGTGCT GTCGAAGTGC GGCTTGCGAT CTCCTGTGTC AAGGGCGCAG CAGGAAGCCA TCACGACCCG CCTCGACCGA CTTGGTATGC TGTTTCACCC CATGAGCGAC CAAGCCGCGG ATCTGGTTGG CATTCTGCGA GCCCTGCGTG GCCGCTGCCC TGTGGCTGGG ATGCAGGAAC CAGGCTTTAT GGAGATTCTG CCGGCGCCTC GGCGGGCTTG A
|
Protein sequence | MSNSTQVAAG RAITVPFHGA DLYVVENNGQ PYTPMKPIVA AMGLDWGSQF RKVAANESRW GIVNLTIPSA GGEQAMTCLP VRKTAAWLTT IEPGKVKSPQ VRARVIQYQN ECDDALWHYW NEGIAVNPRA LYSVSPGDVL TGEEAEALRL MLTTAVDRLP KHKRAAAMVK GWSKLKAHFH VSYRQIPRSE FTEALSIVAR HTAEWDLVDE APSSGALNEQ VARMVRQVEG PNGTPVEVFM PLVNAVLSKC GLRSPVSRAQ QEAITTRLDR LGMLFHPMSD QAADLVGILR ALRGRCPVAG MQEPGFMEIL PAPRRA
|
| |