Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1686 |
Symbol | |
ID | 4665180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1845873 |
End bp | 1846535 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639822888 |
Product | putative phage repressor |
Protein accession | YP_970047 |
Protein GI | 120610369 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.26222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCG AATACGGCTC TCGGCTCCGC GCCGCCCGCA ACCACGCAGG CCTGTCTCAG GTCGAACTTT CCAAGATCAC CGGCATCGCC CAGAGCACAA TCTCGACAGC AGAGAGAACT GGCAATGGCT CGGCGGACAC GCCGGTCTAT GCCAGAGCGT GCGGGGTCGA TGCGCACTGG CTTGCAACCG GCGAGGGTCA GATGCTCTCC CAGCCAGCTA CGCCGACGAA TGCCACTCCG TACGAGACAA CCAAGGTGCG GCCGGTCTAC GTGGTGGGCC GGGGAAATGG AGGAGCGATG CCGGAGAGAC TATGGACCGA TGGGGACTTC CCTGTGGGCG GTACGGACGA GTGCGCGGAT GTTGCTACGA ACGATCCGCG GGCCTTCCTG ATCAGGGTGG AGGGGCCATC CATGGTCCCG CGCTACAACC CTGGTGAGTA CGCCTTGGTC GAACCAGATA CCGAGCCCGA AATCGAAGAC GATGTACTGG TGCGTCTTGT TGACGGACAG ACGATCCTCA AGCGCCTGCT TTCACGTCGC GGAGGCTGGC GTCTCGGAAG CTACAACTCC ATGGACGTGC TTTTCTACAG CTTTGAGGAA GTCACCTGGG TCTATTACGT GGCCCACCCT GTCCCCCGCC GAAAGATCAA AGCTCGGTGC TGA
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Protein sequence | MATEYGSRLR AARNHAGLSQ VELSKITGIA QSTISTAERT GNGSADTPVY ARACGVDAHW LATGEGQMLS QPATPTNATP YETTKVRPVY VVGRGNGGAM PERLWTDGDF PVGGTDECAD VATNDPRAFL IRVEGPSMVP RYNPGEYALV EPDTEPEIED DVLVRLVDGQ TILKRLLSRR GGWRLGSYNS MDVLFYSFEE VTWVYYVAHP VPRRKIKARC
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