Gene Aave_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1686 
Symbol 
ID4665180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1845873 
End bp1846535 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content62% 
IMG OID639822888 
Productputative phage repressor 
Protein accessionYP_970047 
Protein GI120610369 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.26222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG AATACGGCTC TCGGCTCCGC GCCGCCCGCA ACCACGCAGG CCTGTCTCAG 
GTCGAACTTT CCAAGATCAC CGGCATCGCC CAGAGCACAA TCTCGACAGC AGAGAGAACT
GGCAATGGCT CGGCGGACAC GCCGGTCTAT GCCAGAGCGT GCGGGGTCGA TGCGCACTGG
CTTGCAACCG GCGAGGGTCA GATGCTCTCC CAGCCAGCTA CGCCGACGAA TGCCACTCCG
TACGAGACAA CCAAGGTGCG GCCGGTCTAC GTGGTGGGCC GGGGAAATGG AGGAGCGATG
CCGGAGAGAC TATGGACCGA TGGGGACTTC CCTGTGGGCG GTACGGACGA GTGCGCGGAT
GTTGCTACGA ACGATCCGCG GGCCTTCCTG ATCAGGGTGG AGGGGCCATC CATGGTCCCG
CGCTACAACC CTGGTGAGTA CGCCTTGGTC GAACCAGATA CCGAGCCCGA AATCGAAGAC
GATGTACTGG TGCGTCTTGT TGACGGACAG ACGATCCTCA AGCGCCTGCT TTCACGTCGC
GGAGGCTGGC GTCTCGGAAG CTACAACTCC ATGGACGTGC TTTTCTACAG CTTTGAGGAA
GTCACCTGGG TCTATTACGT GGCCCACCCT GTCCCCCGCC GAAAGATCAA AGCTCGGTGC
TGA
 
Protein sequence
MATEYGSRLR AARNHAGLSQ VELSKITGIA QSTISTAERT GNGSADTPVY ARACGVDAHW 
LATGEGQMLS QPATPTNATP YETTKVRPVY VVGRGNGGAM PERLWTDGDF PVGGTDECAD
VATNDPRAFL IRVEGPSMVP RYNPGEYALV EPDTEPEIED DVLVRLVDGQ TILKRLLSRR
GGWRLGSYNS MDVLFYSFEE VTWVYYVAHP VPRRKIKARC