Gene Aave_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1583 
Symbol 
ID4668599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1748558 
End bp1750075 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content70% 
IMG OID639822785 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_969946 
Protein GI120610268 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0815903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CCCACGACGC GTCCGCAGAC GCCACCAGCC CCGCGCCACT GGAGACGACG 
CCGAACCGGC GTGCGTCCCA GCGCACGCGC GTCGGCCTGA ACCTCTTCTG GCGCACTTTT
TTCCTGCTCG CCCTGCTGCT GGTGGGCAGC ATCCTGGCCT GGCTGCAGAC GCTGCGCGCG
CTCGAATTCG AGCCCCGCAC CCTGCAGACC GCGCAGCAGA TCGCCTCCCT CGTGAACCTG
AGCCGTGCCG CGCTGGTGCA TGCGGACGCC ATCGCCCGCG TCTCGCTCAT CAAGACCATG
GCGGACCAGG AGGGCGTGCG CATCCTGCCC CGCGAGCCCA GCGACCGCTT CGACCTCGTG
GACGACACCG CGCTGGGCGT GCGCCTCACC GAGGAACTGA CCGAGCGGCT CGGCCCGGGC
ACCATCGTGG CCGGCAACGT GAACGGCGAG AGCGGGCTGT GGGTGGGCTT CACCATCAAC
GGCGATCCCA ACTGGCTGCT GATGGACCGC TCGCGCCTGA GCACGGCGGG CGGCAAGACC
TGGCTGATCT GGCTCATCAC CGCGGGTGCC CTGTCGCTGG CGGGCGCGGC GGCGATCGCG
CGGCTCATCA ACCGGCCGCT CAAGCAGCTC TCCTACGCCG CCAACCGCGT GCGCGACGGC
GATTTCGCGG CCAGCCAGCT CGACGAGGAA GTGGTGACCA GCGAGATCCG CGAGGTGAAC
ATCGGCTTCA ACCGCATGGC GCAGAAGCTC GCGAAGCTCG AACAGGACCG GGCGGTGATG
CTGGCCGGCA TCTCCCACGA CCTGCGCACG CCGCTGGCGC GCCTGCGGCT GGAAACCGAG
ATGAGCGTGA TCGACGACGT GGCCCGCGAG CACATGGTGG CCGACATCGT GCAGCTCGAC
GCCACCATCG ACAAGTTCCT GGACTACGCG CGGCCGGACC ACGTCACGCT CACGCCGGTG
AACCTGCACG GCGTGGTGTC TTCCTGCGTG TATGCGGTGC AGGACCACCG CGAACTGCAG
ATCTCCATGA ACGTGCCGGA AGACCTGATC GTGCTGGCCG ACGAGGTGGA GCTGGCGCGC
GTGATCTCCA ACCTGCTGGA GAACGCCCGC CGCTACGGCA AGACGCCCGA GAGCGGCACG
GCCTCCGTGG AAATCGCCGC CAAGGGGCGC GAGAAATGGG TGCTGGTGAA GGTGCGCGAC
CACGGCCCGG GCGTGCCGCC CGACCAGTTG AGCAACCTGA CCAAGCCCTT CTTCCGCGGC
AACTCCGCGC GCACGGCGGC CGCGGGCGCG GGCCTGGGCC TGGCCATCGT GGACAAGACC
GTGCAGCGCA TGGGCGGCAT CTTCGCGCTG GCCAATTCCG GCTCCGGTGG CCTGGTGGCG
CACATCCAGC TGCAGCGCGC CTCGCAGCTG CCGGCCGGCA AGGACCCCAA GCAGCGGCTG
CAGCGCCCGC AGATCAAGCG CCAGCTGCCG CCCGACGCGG CCAAGGGCGG CAAGCCCGTC
AAGCCGGCGA AGGCCTGA
 
Protein sequence
MSASHDASAD ATSPAPLETT PNRRASQRTR VGLNLFWRTF FLLALLLVGS ILAWLQTLRA 
LEFEPRTLQT AQQIASLVNL SRAALVHADA IARVSLIKTM ADQEGVRILP REPSDRFDLV
DDTALGVRLT EELTERLGPG TIVAGNVNGE SGLWVGFTIN GDPNWLLMDR SRLSTAGGKT
WLIWLITAGA LSLAGAAAIA RLINRPLKQL SYAANRVRDG DFAASQLDEE VVTSEIREVN
IGFNRMAQKL AKLEQDRAVM LAGISHDLRT PLARLRLETE MSVIDDVARE HMVADIVQLD
ATIDKFLDYA RPDHVTLTPV NLHGVVSSCV YAVQDHRELQ ISMNVPEDLI VLADEVELAR
VISNLLENAR RYGKTPESGT ASVEIAAKGR EKWVLVKVRD HGPGVPPDQL SNLTKPFFRG
NSARTAAAGA GLGLAIVDKT VQRMGGIFAL ANSGSGGLVA HIQLQRASQL PAGKDPKQRL
QRPQIKRQLP PDAAKGGKPV KPAKA