Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1575 |
Symbol | |
ID | 4665427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1738115 |
End bp | 1738903 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822777 |
Product | YaeC family lipoprotein |
Protein accession | YP_969938 |
Protein GI | 120610260 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.528341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA AAGCCCTCTC CGCCCTGGCC CTCGCCGCGC TCGCCGTCTC TGCCCACGCG GCCGACACCG TCCTCAAGGT GGCGGCCTCC GCCGTGCCGC ATGCCGAGAT CCTGAACTTC GTGAAGCCCC GGCTCAAGGC CCAGGGCGTG GACCTGCAGG TGCGCGAATT CAGCGACTAC ATCCAGCCCA ATGCCGCGGT GGAAGACAAG CAGCTCGACG CCAACTTCTT CCAGCACCAG CCCTACCTGG ACAGCTACAA CAAGGACCGC AAGAGCAGCC TCGTGGCCGT GCCGGACGGC AAGGTCCACG TGGAGCCCTT CGGCGCCTAC TCGAAGAAGA TCAAGTCCGT GAGCGAACTC AAGGACGGCG CCACCATCGC CATCCCCAAC GATCCGTCGA ACGCGGGCCG CGCGCTGATC CTGCTGCAGA AGCAGGGCCT CATCACGCTC AAGGACCCGA AGAACATCAC GGCCACGCCG ATCGACATCG CCCGGAACCC GAAGAAACTC AAGTTCCGCG AACTGGAAGC CGCCCTGCTG CCCCGCGCGC TGCAGGACGT GGACCTGGCC CTGATCAACA CCAACTACGC GATCGAGGCC AGGCTGAACC CGACGAAGGA TGCGCTGTTC ATCGAAGGCA GCGATTCGCC CTACGCCAAC CTGATCGCCG CCCGCGCCGA CCGCGCCAAC GACCCGGCGA TCGCCAAGCT GGTGAAGGCG CTGCACACGC CCGAAGTGAA GAAGTTCATC CAGGACAAGT ACCAGGGCGC GATCGTGCCG GCGTTCTGA
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Protein sequence | MLKKALSALA LAALAVSAHA ADTVLKVAAS AVPHAEILNF VKPRLKAQGV DLQVREFSDY IQPNAAVEDK QLDANFFQHQ PYLDSYNKDR KSSLVAVPDG KVHVEPFGAY SKKIKSVSEL KDGATIAIPN DPSNAGRALI LLQKQGLITL KDPKNITATP IDIARNPKKL KFRELEAALL PRALQDVDLA LINTNYAIEA RLNPTKDALF IEGSDSPYAN LIAARADRAN DPAIAKLVKA LHTPEVKKFI QDKYQGAIVP AF
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