Gene Aave_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1575 
Symbol 
ID4665427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1738115 
End bp1738903 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID639822777 
ProductYaeC family lipoprotein 
Protein accessionYP_969938 
Protein GI120610260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.528341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA AAGCCCTCTC CGCCCTGGCC CTCGCCGCGC TCGCCGTCTC TGCCCACGCG 
GCCGACACCG TCCTCAAGGT GGCGGCCTCC GCCGTGCCGC ATGCCGAGAT CCTGAACTTC
GTGAAGCCCC GGCTCAAGGC CCAGGGCGTG GACCTGCAGG TGCGCGAATT CAGCGACTAC
ATCCAGCCCA ATGCCGCGGT GGAAGACAAG CAGCTCGACG CCAACTTCTT CCAGCACCAG
CCCTACCTGG ACAGCTACAA CAAGGACCGC AAGAGCAGCC TCGTGGCCGT GCCGGACGGC
AAGGTCCACG TGGAGCCCTT CGGCGCCTAC TCGAAGAAGA TCAAGTCCGT GAGCGAACTC
AAGGACGGCG CCACCATCGC CATCCCCAAC GATCCGTCGA ACGCGGGCCG CGCGCTGATC
CTGCTGCAGA AGCAGGGCCT CATCACGCTC AAGGACCCGA AGAACATCAC GGCCACGCCG
ATCGACATCG CCCGGAACCC GAAGAAACTC AAGTTCCGCG AACTGGAAGC CGCCCTGCTG
CCCCGCGCGC TGCAGGACGT GGACCTGGCC CTGATCAACA CCAACTACGC GATCGAGGCC
AGGCTGAACC CGACGAAGGA TGCGCTGTTC ATCGAAGGCA GCGATTCGCC CTACGCCAAC
CTGATCGCCG CCCGCGCCGA CCGCGCCAAC GACCCGGCGA TCGCCAAGCT GGTGAAGGCG
CTGCACACGC CCGAAGTGAA GAAGTTCATC CAGGACAAGT ACCAGGGCGC GATCGTGCCG
GCGTTCTGA
 
Protein sequence
MLKKALSALA LAALAVSAHA ADTVLKVAAS AVPHAEILNF VKPRLKAQGV DLQVREFSDY 
IQPNAAVEDK QLDANFFQHQ PYLDSYNKDR KSSLVAVPDG KVHVEPFGAY SKKIKSVSEL
KDGATIAIPN DPSNAGRALI LLQKQGLITL KDPKNITATP IDIARNPKKL KFRELEAALL
PRALQDVDLA LINTNYAIEA RLNPTKDALF IEGSDSPYAN LIAARADRAN DPAIAKLVKA
LHTPEVKKFI QDKYQGAIVP AF