Gene Aave_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1530 
Symbol 
ID4669765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1694579 
End bp1695298 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID639822732 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_969893 
Protein GI120610215 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC ACACCATCAA GGTCGCCTGC TCGAACTGCA ACCTGCGCGA GCTCTGCATG 
CCGCTGGGCC TGAACGAGCA GCAGCTGCAG CGCATCGATG ACATCGTCGC CACGCGCCGC
AAGGTCAAGC GCGGCGGCAC GCTGTTCCGC AACGGCGAGG CCTTCACGTC GCTCTTCGCC
ATCCGCACGG GCTTCTTCAA GACCTGCGTG GCCACCGAGG ACGGACGCGA CCAGGTGACG
GGCTTCCAGA TGGCCGGCGA GATCATCGGG CTCGACGGCA TCGTCAGCGA CCACCACACC
TGCGACGCCG TCGCGCTGGA GGATGCCGAG GTGTGCGTCA TGCCCTTCGA GCGCATCGAG
GAGCTGTCGC GCGAGGTCAC CGCCCTGCAG CACCACGTCC ACAAGATCAT GAGCCGCGAG
ATCGTGCGCG AGCACGGCGT GATGCTGCTG CTCGGCAGCA TGCGCGCGGA GGAGCGCCTC
GCCGCCTTCC TGCTCAACCT CGTTCAGCGC CTGCATGCGC GGGGCTTCTC GCAGTCCGAA
CTGGTGCTGC GCATGACCCG CGAGGAGATC GGCAGCTACC TGGGCCTCAA GCTGGAGACC
GTGAGCCGCA CCTTCTCCAA GTTCGTCGAG GAAGGCATCG TCGAGGTCAA GCAGCGGCAC
GTGCGCATCG TCGAGCCGGA TGCGCTCAAG CGGATCGTGA ACAGCCAGGC TTGTAGTTGA
 
Protein sequence
MNPHTIKVAC SNCNLRELCM PLGLNEQQLQ RIDDIVATRR KVKRGGTLFR NGEAFTSLFA 
IRTGFFKTCV ATEDGRDQVT GFQMAGEIIG LDGIVSDHHT CDAVALEDAE VCVMPFERIE
ELSREVTALQ HHVHKIMSRE IVREHGVMLL LGSMRAEERL AAFLLNLVQR LHARGFSQSE
LVLRMTREEI GSYLGLKLET VSRTFSKFVE EGIVEVKQRH VRIVEPDALK RIVNSQACS