Gene Aave_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1513 
Symbol 
ID4667070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1677668 
End bp1678681 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID639822715 
Producthypothetical protein 
Protein accessionYP_969876 
Protein GI120610198 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.283946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.153712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGA ACCCTTTCCA GGCGCCCGCA GCGGCGCTGC CCCGGCGCGC CCTGCTGCGC 
GGGGCTGCCG CCACGGGCCT CGCGCTCGCC GCGGGCCGCG CCCTCGCGAA CGACCCCTGG
CCGGCCAAGC CGGTCACGCT GGTGGTGCCG TTCCCGGCCG GCGGCGGCAC CGACGCGTTC
GCGCGACCGC TGGCGGCGCA GTTTTCCAAG TCCACCGGCA AGACGCTGGT CATCGACAAC
CGCGGTGGTG CCGGCGGCAC GGTGGGCGCG AGCTATGCGT CGAAGGCCGC GCCGGACGGC
TACACGCTGT TCATGGGCGG AACGCACCAC GTGATCGCGC CTTCGATGTA TCCGCGGCTG
GACTACGACA TCGAAAAGGA TTTCATCCCG CTGGCGCTGC TGGCCAACGT GCCGCAGGTG
CTGGTGGTGA ACCCGCGCAA CGTGCCGTTC ACGGCGTTTC CGGCCTTCCT CGACCACGTG
CGGCGCAATC CGGCCAAGCT CAACTACGCA TCGGCGGGTT CGGGAACCTC CCACCACCTG
GCCGGAGAGC TCTTCAAGCT GCAGTCCAAT ACCTTCATCA CGCACATTCC CTACCGGGGC
GCAGGACCGG CGCTGCAGGA CCTGATCGGT GGCAACGTGG ACATGATGTT CGACGGTCTG
GGCTCTTCCG CGGCGCACAT CAAGGGCGGG CGCATCCGCG CGCTGATGGT GTCGGGCAAG
CAGCGCAATC CGGCCTTCCC GGATGTGCCG TGCGCGGCCG AGGTGGGGTT GCCCGACTAC
ACGGTGACCA CGTGGTACGG CCTCTGGGCG CCCCGCGGCA CGCCGGCCGA CCTGCAGGCG
CGCATCGTCG AGGAGGTGCG CCGCATCGGC GCGGCCGACG AGATCAAGGC CGTGTGGGCG
AAGAATGGCG CCGATTACGG CGGGCTCACG CAGGCGCAGT TCGGTGCCAT GGTGGGGGCG
GAGGTGAAGC GCTGGGCGCA GGTGGTGAAG GCTTCCGGGG CCAAATTGGA GTGA
 
Protein sequence
MPVNPFQAPA AALPRRALLR GAAATGLALA AGRALANDPW PAKPVTLVVP FPAGGGTDAF 
ARPLAAQFSK STGKTLVIDN RGGAGGTVGA SYASKAAPDG YTLFMGGTHH VIAPSMYPRL
DYDIEKDFIP LALLANVPQV LVVNPRNVPF TAFPAFLDHV RRNPAKLNYA SAGSGTSHHL
AGELFKLQSN TFITHIPYRG AGPALQDLIG GNVDMMFDGL GSSAAHIKGG RIRALMVSGK
QRNPAFPDVP CAAEVGLPDY TVTTWYGLWA PRGTPADLQA RIVEEVRRIG AADEIKAVWA
KNGADYGGLT QAQFGAMVGA EVKRWAQVVK ASGAKLE