Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1506 |
Symbol | |
ID | 4667526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1668470 |
End bp | 1670329 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822708 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_969869 |
Protein GI | 120610191 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.189174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAT ACCGTTCCAA GACCTCCACT GCCGGACGCA ACATGGCCGG TGCCCGCTCC CTGTGGCGCG CCACCGGCAT GAAGGACGAA GACTTCAGCA AGCCGATCAT CGCGGTGGTG AACTCGTTCA CCCAGTTCGT GCCCGGCCAC GTCCACCTGA AGGACCTGGG CCAGCTCGTG GCCCGCGAGA TCGAGGCGGC CGGCGGTGTC GCCAAGGAGT TCAACACCAT CGCGGTGGAT GACGGCATCG CGATGGGCCA CGACGGCATG CTGTATTCGC TGCCCAGCCG CGACATCATC GCGGACTCGG TCGAGTACAT GGTGAACGCG CACTGCGCCG ACGCCATGGT CTGCATCTCC AACTGCGACA AGATCACGCC CGGCATGCTG ATGGCCGCGA TGCGCCTGAA CATCCCCGTG GTGTTCGTCT CCGGCGGCCC CATGGAGGCC GGCAAGACGC GCCTGGCCAA CCCCGTCACC AAGACCATCG AGTTCAAGAA GCTCGACCTG GTGGACGCGA TGGTGATCGC CGCCGACGAC AAGTATTCCG ACGCCGACGT GGCCGAGGTG GAGCGCTCCG CCTGCCCCAC CTGCGGTTCG TGCTCGGGCA TGTTCACCGC CAATTCCATG AACTGCCTGA CCGAGGCGCT GGGCCTGTCC CTGCCCGGCA ACGGCACGGT GGTGGCCACG CACGCCGACC GCGAGCAGCT CTTCAAGCGC GCCGGCCGCC GCATCGTGGA ACTGGCCCGC CGGTACTACG AGCAGGACGA CGAGCGGGTT CTGCCGCGCT CGGTGGGCTT CAAGGCCTTC GAGAACGCGA TGACGCTGGA CATCGCGATG GGCGGCTCCA CCAACACCAT CCTGCACCTG CTGGCCATCG CCCAGGAGGC CGGCATCGAC TTCACCATGG CCGACATCGA CCGCCTGTCG CGCGTGGTGC CGCAGCTGTG CAAGGTGGCG CCCAACACCA ACAAGTACCA CATCGAGGAC GTGCACCGCG CCGGGGGCAT CATGGCCATC CTGGGCGAAC TGGACCGCGC GGGCCGCCTG CACACCGATG CGCCCACCGT GCACGCCCCC ACGCTGGGCG ACGCGCTCGC GCAGTGGGAC ATCACCCGCA CGCAGGACGA GGCCGTGCGC CATTTCTACA TGGCGGGCCC GGCCGGCATC CCGACGCAGG TGGCGTTCAG CCAGAACACG CGCTGGCCCA GCCTGGACCT GGACCGCGCC GAGGGCTGCA TCCGCTCCGT CGAGCATGCC TTCTCGAAGG AAGGGGGCCT GGCCGTGCTG CGCGGCAACA TCGCGCTGGA TGGCTGCGTT GTCAAGACGG CCGGCGTGGA CGAATCCATC CACGTGTTCG AGGGCACGGC CCACGTGACC GAATCGCAGG ACGAGGCGGT GGAGAACATC CTGGCCGACA AGGTCAAGGC CGGCGACATC GTCATCGTGC GCTACGAAGG CCCCAAGGGC GGCCCCGGCA TGCAGGAAAT GCTCTACCCG ACCAGCTACA TCAAATCCAA GGGCCTGGGC AAGGCCTGCG CGCTGCTGAC CGACGGGCGC TTCTCGGGCG GCACCTCGGG CCTTTCGATC GGCCACTGCT CGCCCGAGGC GGCGGCCGGC GGCGCGATCG GCCTGGTGCA GAACGGCGAC CGCATCCGCA TCGACATCCC CAATCGCACG ATCGACGTGC TGGTGTCCGA CGAGGAACTG GCCCGCCGCC GCGCCGAGCA GGATGCCAAG GGCTGGAAGC CCGCGAAGCC GCGCCCGCGC AAGGTGTCGG CGGCGCTCAA GGCCTATGCC AAGCTGGTGA TGTCGGCCGA CAAGGGCGCG GTGCGCGACC TGTCGCTGCT GGACGACTGA
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Protein sequence | MPAYRSKTST AGRNMAGARS LWRATGMKDE DFSKPIIAVV NSFTQFVPGH VHLKDLGQLV AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDII ADSVEYMVNA HCADAMVCIS NCDKITPGML MAAMRLNIPV VFVSGGPMEA GKTRLANPVT KTIEFKKLDL VDAMVIAADD KYSDADVAEV ERSACPTCGS CSGMFTANSM NCLTEALGLS LPGNGTVVAT HADREQLFKR AGRRIVELAR RYYEQDDERV LPRSVGFKAF ENAMTLDIAM GGSTNTILHL LAIAQEAGID FTMADIDRLS RVVPQLCKVA PNTNKYHIED VHRAGGIMAI LGELDRAGRL HTDAPTVHAP TLGDALAQWD ITRTQDEAVR HFYMAGPAGI PTQVAFSQNT RWPSLDLDRA EGCIRSVEHA FSKEGGLAVL RGNIALDGCV VKTAGVDESI HVFEGTAHVT ESQDEAVENI LADKVKAGDI VIVRYEGPKG GPGMQEMLYP TSYIKSKGLG KACALLTDGR FSGGTSGLSI GHCSPEAAAG GAIGLVQNGD RIRIDIPNRT IDVLVSDEEL ARRRAEQDAK GWKPAKPRPR KVSAALKAYA KLVMSADKGA VRDLSLLDD
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