Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1476 |
Symbol | |
ID | 4665949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1633519 |
End bp | 1634067 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639822679 |
Product | hypothetical protein |
Protein accession | YP_969841 |
Protein GI | 120610163 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACCT TAAGCAAGAC CGGCAAGAGC GGTCAGAAGT TCATTGCCCG CAATCGCGCC CCACGCGTTC AGATCGAATA CGACGTCGAG ATCTACGGCT CCGAGAAGAA GGTGCAGATT CCCTTCGTCA TGGGCGTGAT GGCGGACCTC TCCGGCAAGC CGGTGGATCC CCTGCCGGAG ATCGCGGACC GCAAGTTCCT CGACATCGAC ATCGACAACT TCGATGCGCG CATGAAGTCG ATCAAGCCGC GCGCGTCCTT CAACGTGCCC AACACGCTGA CGGGCGATGG CCGCCTGCAC ATCGATCTGA CGTTCGAGAG CATGGACGAC TTCTCCCCGG CCGCCATCGC GCGCAAGGTG GGGGCGCTCA ATTCCCTGCT GGAAGCCCGC ACCCAGCTGC ACAACCTGCT GTCCTACATG GACGGCAAGC AGGGCGCTGA GGAACTGATC AGCAAGGTGC TGAAGGACCC GGCGCTGCTC AAATCGCTGG CCGCGATGCC CAACCGGCCC GCCGGCGGCG TGACCGAGAA GACCGACGAC GCTCAGTGA
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Protein sequence | MVTLSKTGKS GQKFIARNRA PRVQIEYDVE IYGSEKKVQI PFVMGVMADL SGKPVDPLPE IADRKFLDID IDNFDARMKS IKPRASFNVP NTLTGDGRLH IDLTFESMDD FSPAAIARKV GALNSLLEAR TQLHNLLSYM DGKQGAEELI SKVLKDPALL KSLAAMPNRP AGGVTEKTDD AQ
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