Gene Aave_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1460 
Symboltig 
ID4666302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1609386 
End bp1610696 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content66% 
IMG OID639822662 
Producttrigger factor 
Protein accessionYP_969825 
Protein GI120610147 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.944672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTA CTGTTGAAAC CCTTGAAAAG CTCGAGCGCA AGATCACGCT GAGCCTGCCC 
CTGACCGCCA TCCAGTCGGA AGTGGACTCG CGCCTCAAGC GCCTGGCCCG CACGGTGAAG
ATGGACGGCT TCCGTCCCGG CAAGGTGCCG ATGAACGTCG TGGCCCAGCG CTACGGTTAC
TCCGTGCAGT ACGAAGTGCT GAACGACAAG GTCGGCGAGG CCTTCGCCCA GGCCGCCAAT
GAGGCCAACC TGCGCGTCGC CGGCCAGCCC CGCATCACCG AGAAGGAAGG CGCTCCCGAA
GGCCAGGTGA CCTTCGACGC CGTGTTCGAG GTGTTCCCCG AAGTGAAGAT CGGCGATCTG
TCCACGGCCG ACGTCGAGAA GATCTCCGCC GACGTCACCG ACGCCGCCAT CGACAAGACC
ATCGACATCC TGCGCAAGCA GCGCCGCACC TTCGCCCAGC GCGCCCAGGG CACGCCTGCC
GAAGACGGCG ACCGCGTGAC CGTGGACTTC GAAGGCAAGA TCGACGGCGA GACATTCTCC
GGCGGCAAGG CCGAAGACTT CCAGTTCCTG GTGGGCGAAG GCCAGATGCT CAAGGAATTC
GAGGACGCCG TGCGCGGCAT GAAGGCCGGT GAAAGCAAGA CCTTCCCCCT CGCCTTCCCC
GAGGACTACC ATGGCAAGGA CGTGGCCGGC AAGACCGCCG ATTTCCTGGT CACCGTGAAG
AAGATCGAGG CAGCCCACCT GCCCGAAGTC AATGAGCAGC TGGCGAAGTC CCTGGGCATC
GCCGACGGCA CCGTGGAAGG CCTGCGCGCC GACATCAAGA AGAACCTCGA GCGCGAGGTC
AAGTTCCGCC TGCTGGCCCG CAACAAGCAG GCCGTGATGG AAGCCCTGGT GTCCAAGGCC
GAGCTGGACC TGCCCAACGC CAGCGTGCAG GCCGAGATCG CCCGCCTGCT GGAAGGCGCC
CGCGCCGACC TCAAGCAGCG CGGCATCAAG GACGCCGACA AGGCCGAGAT CCCCGAGGAC
GTGTTCCGCC CGCAGGCCGA GCGCCGCGTG CGCCTGGGCC TGGTCGTGGC CGAACTCGTG
CGCGCCAACA ACCTGCACGC CACCCCCGAG CAGTTGAAGG CGCACGTGGA CGAGCTCGCC
GCCAGCTACG AGAAGCCCGA GGACGTGGTC CGCTGGTACT TCGGCGACCG CCAGCGCCTG
GCCGAGGTCG AGGCCGTGGT CATCGAGAAC AACGTCACGG CGTTCGTGCT GGACAAGGCC
AAGGTCACGG AAAAGGCCAT TTCCTTCGAC GAACTGATGG GCCAGGGCTG A
 
Protein sequence
MAVTVETLEK LERKITLSLP LTAIQSEVDS RLKRLARTVK MDGFRPGKVP MNVVAQRYGY 
SVQYEVLNDK VGEAFAQAAN EANLRVAGQP RITEKEGAPE GQVTFDAVFE VFPEVKIGDL
STADVEKISA DVTDAAIDKT IDILRKQRRT FAQRAQGTPA EDGDRVTVDF EGKIDGETFS
GGKAEDFQFL VGEGQMLKEF EDAVRGMKAG ESKTFPLAFP EDYHGKDVAG KTADFLVTVK
KIEAAHLPEV NEQLAKSLGI ADGTVEGLRA DIKKNLEREV KFRLLARNKQ AVMEALVSKA
ELDLPNASVQ AEIARLLEGA RADLKQRGIK DADKAEIPED VFRPQAERRV RLGLVVAELV
RANNLHATPE QLKAHVDELA ASYEKPEDVV RWYFGDRQRL AEVEAVVIEN NVTAFVLDKA
KVTEKAISFD ELMGQG