Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1457 |
Symbol | |
ID | 4667347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1604726 |
End bp | 1607152 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822659 |
Product | Lon-A peptidase |
Protein accession | YP_969822 |
Protein GI | 120610144 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.181081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGGAC ATACCCCCCT GCCAGCCACC CCCATCGACC TCCCACTGCT TCCCTTGCGC GACGTGGTGG TGTTCCCCCA CATGGTGATT CCGCTGTTCG TGGGCCGGCC CAAGAGCATC AAGGCCCTGG AACTGGCCAT GGACGCCGAC CGGCGCATCA TGCTGGTCGC CCAGAAGACC GCGGCCAAGG ACGAGCCGCT GGTGTCCGAC ATGTTCGACG TCGGCTGCGT CTCCACGATC CTGCAGATGC TCAAGCTGCC CGACGGCACC GTCAAGGTGC TGGTGGAAGG CCAGCAGCGG GCCCAGGTCA CCTCCATCGA GGACCATGAA AGCCACTTCA CCTCCACCGT GACGCCCGTG CCCGCCAGCG ACGGCGACCA CAAGCCCAGC GAGATCGAAG CGCTGCGCCG CGCGGTGATG CAGCAGTTCG ACCAGTACGT CAAGCTGAAC AAGAAGATCC CGCCCGAGAT CCTCACCTCC ATCGCGAGCA TCGACGATCC GGGCCGCCTT GCCGACACCA TCGCCGCCCA CCTGCCCCTC AAGCTGGAGA ACAAGCAGGC CGTGCTGGAC CTGGCCGATG TCAAGGAACG CCTCGAGAAC CTGTTCGAGC AGCTCGACCG CGAGGTGGAC ATCCTCAACG TGGACAAGCG CATCCGCGGC CGCGTCAAGC GCCAGATGGA GAAGAACCAG CGCGACTTCT ACCTGAACGA GCAGGTGAAG GCCATCCAGA AGGAACTGGG CGAAGGCGAG GAAGGCGCGG ACATCGAGGA GATCGAGAAG AAGATCAAGG CCGCGAAGAT GCCCGCGGAC GCGCGCAAGA AGGCCGAGAG CGAACTCAAG AAGCTCAAGC TGATGTCGCC CATGTCGGCG GAAGCCACGG TCGTGCGCAA CTACATCGAG GTCCTGACCG GCCTGCCCTG GAGCAAGCGC ACGAAGATCA AGCACGACCT CGCCAACGCG GAGGAAGTGC TCAACGAGGA CCACTACGGC CTGGACAAGG TCAAGGACCG CATCCTCGAA TACCTCGCGG TGCAGCAGCG CGTGGACAAG GTCAAGGCCC CCATCCTCTG CCTGGTGGGC CCGCCCGGGG TCGGCAAGAC CTCGCTCGGC CAGTCCATCG CCAAGGCGAC GGGCCGCAAG TACGTGCGCA TGGCGCTCGG CGGCATGCGC GACGAGGCGG AAATCCGCGG CCACCGCCGC ACCTACATCG GCGCCATGCC CGGCAAGGTG CTGCAGAGCC TGAACAAGGT CGGCACACGC AACCCGCTCT TCCTGCTCGA CGAGATCGAC AAGCTGGGCA CGGACTTCCG CGGCGACCCG TCCAGCGCGC TGCTGGAAGT GCTCGACCCG GAGCAGAACC ACAAGTTCGG CGACCACTAC GTGGAGGTCG ATTTCGACCT GAGCGACGTG ATGTTCGTGG CCACGTCGAA CTCCATGAAC ATCCCGCCCG CCCTGCTGGA CCGGATGGAA GTCATCCGCC TCTCGGGCTA CACGGAAGAC GAGAAGGCGA ACATCGCCAT CAAGTACCTG CTGCCCAAGC AGATGGTCAA CAACGGCGTC AAGGACGAGG AGTTGCGGGT CGAGGAAAGC GCGGTGCGCG ACGTCATCCG CTACTACACC CGCGAGGCAG GCGTGCGCTC GCTCGAGCGC GAACTCTCCA AGATCTGCCG AAAGGTGGTC AAGGGCCTGC AGCTCAAGAA GCTCGAGCCC CAGGTGGTGG TCACCGCGGA CAACCTGGCC GAATACCTGG GCGTGCGCAA GCACACCTAT GGCCGGGCGG AACAGCAGAA CCAGGTGGGC CAGGTGGTCG GCCTCGCGTG GACCGAGGTC GGCGGCGACC TGCTCACCAT CGAAGCCGCG ACCATGCCCG GCAAGGGAAC CATCACGCGC ACGGGCTCGC TCGGCGACGT CATGAAGGAA TCCGTGGAAG CCGCGCGCAC CGTGGTGCGC AGCCGCGCCC ACCGCCTGGG CATCAAGGAC GAGGTGTTCG AGAAGCGCGA CATGCACATC CACGTGCCGG ACGGTGCCAC GCCCAAGGAT GGCCCGAGCG CCGGCGCGGC CATGACCACG GCCTTCGTAT CCGCCCTCAC GGGCATCCCC GTGCGCAGCG ATGTCGCGAT GACCGGCGAG ATCACCCTGC GGGGCGAGGT CACGGCCATC GGCGGCCTGA AGGAAAAGCT GCTCGCGGCA CTGCGCGGCG GCATCAAGAC GGTGCTGATT CCCGAGGAAA ACGTCAAGGA CCTGCAGGAG ATCCCGGACA ACGTGAAGAG CGGCCTGGAG ATCATTCCGG TCAAGTGGAT CGACAAGGTG CTGGAAGTCG CCCTGGAGCG CAAGCCGATC GCGCTGACGG AAGAAGAGAT CGCCGCGTCC ATCACCGCCC GGGAAAACCG CCAGGCACAG GGCTCCACGG ATTCCGTGAA GCATTGA
|
Protein sequence | MSGHTPLPAT PIDLPLLPLR DVVVFPHMVI PLFVGRPKSI KALELAMDAD RRIMLVAQKT AAKDEPLVSD MFDVGCVSTI LQMLKLPDGT VKVLVEGQQR AQVTSIEDHE SHFTSTVTPV PASDGDHKPS EIEALRRAVM QQFDQYVKLN KKIPPEILTS IASIDDPGRL ADTIAAHLPL KLENKQAVLD LADVKERLEN LFEQLDREVD ILNVDKRIRG RVKRQMEKNQ RDFYLNEQVK AIQKELGEGE EGADIEEIEK KIKAAKMPAD ARKKAESELK KLKLMSPMSA EATVVRNYIE VLTGLPWSKR TKIKHDLANA EEVLNEDHYG LDKVKDRILE YLAVQQRVDK VKAPILCLVG PPGVGKTSLG QSIAKATGRK YVRMALGGMR DEAEIRGHRR TYIGAMPGKV LQSLNKVGTR NPLFLLDEID KLGTDFRGDP SSALLEVLDP EQNHKFGDHY VEVDFDLSDV MFVATSNSMN IPPALLDRME VIRLSGYTED EKANIAIKYL LPKQMVNNGV KDEELRVEES AVRDVIRYYT REAGVRSLER ELSKICRKVV KGLQLKKLEP QVVVTADNLA EYLGVRKHTY GRAEQQNQVG QVVGLAWTEV GGDLLTIEAA TMPGKGTITR TGSLGDVMKE SVEAARTVVR SRAHRLGIKD EVFEKRDMHI HVPDGATPKD GPSAGAAMTT AFVSALTGIP VRSDVAMTGE ITLRGEVTAI GGLKEKLLAA LRGGIKTVLI PEENVKDLQE IPDNVKSGLE IIPVKWIDKV LEVALERKPI ALTEEEIAAS ITARENRQAQ GSTDSVKH
|
| |