Gene Aave_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1447 
Symbol 
ID4668378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1595060 
End bp1595836 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID639822646 
Productexodeoxyribonuclease III 
Protein accessionYP_969812 
Protein GI120610134 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.529853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG CCACCTGGAA CGTCAACTCC CTCTCCATAC GGCTGCCCCA GGTGCTGGCC 
TGGCTGGCCG ACAACCCCGT GGATGCCATC GGCCTGCAGG AACTCAAGCT GGTGGACGAG
AAATTCCCCC ACGATGCCTT CGAATCCGCC GGCTACCACG CCGTGAGCTT CGGGCAGAAA
ACCTACAACG GGGTCGCCAT CCTGAGCCGC ACGCCCGTAC GCGACGTGGT GCGCAACATC
CCCGGGCACG AAGACACCCA GGCCCGCGTG ATCGCGGCGA CGCTGGACAC GCCCCAAGGC
CCGCTCCGGT TCATCAACTG CTACTTCGTG AACGGCCAGG CCCCGGGCAC GGAAAAGTTC
GCCTACAAGA TGCTCTGGCT GGCCGCGCTG CACCGATGGG TCAGGGAGGA ACTGCTCGCC
CATCCTCGGC TGGTGCTCGT GGGCGACTTC AACGTAGCGC CGGAAGACCG TGACTCCTTC
GATCCCGTGG GCTTGAAAGA CACCATCCAC CACACCGTGG AAGAGCGCAC CCATTTCCAG
AGCCTTCTGC AACTGGGCCT CACGGACGCC TACCGCATGT TCGAGCAACC CGAGAAAAGC
TTCTCGTGGT GGGACTACCG CATGCTGGGT TTCCAGAAGA ACCGGGGCTT GCGCATCGAC
CATATCCTGG TGAGCGAAGC CCTGCGCGGC CAAGTCACCG CGTGCACGAT CGACCGGCAA
CCTCGCAAGA ACCCGCAGCC CAGCGACCAC GCGCCGGTCG TGGCCACGCT CGGCTGA
 
Protein sequence
MKLATWNVNS LSIRLPQVLA WLADNPVDAI GLQELKLVDE KFPHDAFESA GYHAVSFGQK 
TYNGVAILSR TPVRDVVRNI PGHEDTQARV IAATLDTPQG PLRFINCYFV NGQAPGTEKF
AYKMLWLAAL HRWVREELLA HPRLVLVGDF NVAPEDRDSF DPVGLKDTIH HTVEERTHFQ
SLLQLGLTDA YRMFEQPEKS FSWWDYRMLG FQKNRGLRID HILVSEALRG QVTACTIDRQ
PRKNPQPSDH APVVATLG