| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1417 |
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| Symbol | |
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| ID | 4668216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1557246 |
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| End bp | 1558265 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639822611 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_969782 |
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| Protein GI | 120610104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTCCG CCTCGCGCCC ATCCGCCAGC GGCCTCCCCG AGGGCCTGGC GGACGATACG
GCCGAAGCGG AAGACGGCTC CGACGGCGCG GAAACCCGGG TCGTGCAGGC ATCGCCCGCG
CAGCACGGGG CCCGGCTCGA CAAGGCGCTG GCCGAACTCG TGCCCGAGTT CTCCCGCAGC
TACCTCCAGC AATTGCTGGG CGAGGGCGGG GTGCTGGTCA ACGGCCGCGC GGCGGCCAAG
CCGTCGGCCC GCGTGCAGGC CGGCGACGTG CTCTCGGTCG AGCTGCGGCC CACGCCCCAG
AGCCAGGCAT TCCGCCCGGA AGCCATGGCG CTGGACACCG TGTATGAAGA CGAGCACCTG
CGCATCGTCA ACAAGCCGGC CGGACTGGTC GTCCATCCCG CCCCCGGCAA CTGGAGCGGC
ACGCTGCTCA ACGGCCTGCT CGCGCTGGAT CCGCGGGCCG GCAACGTGCC GCGCGCGGGC
ATCGTCCACC GGCTCGACAA GGACACCAGC GGCCTCATGG TCGTCGCGCG CGAGCGCTCC
GTGATGGACG CGCTCGTGCG GATGATCGCC GCGCGCGAGG TCAGCCGCCA GTACCTGGCC
CTGGGGCACC GTGCCTGGCA GGGGGCGCAG ACCCGCGTGG TGGAAGAGGC CATCGGGCGC
GATCCGCGCA ACCGCCTGCG CATGGCGGCG GTGGACCTGG CCGTGCATGC CGGCAAGCCG
GCCCGCACCG ACATCGCCGT GCTCGACACG TGCGAAAACG GCTGCCTGGT GCACTGCACG
CTCCACACCG GGCGCACCCA CCAGATCCGC GTTCACATGG CGTGGCTGCG GCATCCGCTC
GTGGCCGATG CGCTCTATGG CGGCGAGCCG GCGGCGGGCC TGTCCCGGCA GGCGCTGCAC
GCCTACCGCC TGGCGTTCGC CCACCCCGTC ACCGGACAGC CCCTGCTTTT CCATGCGCCG
CTGCCCGGCG ACATGGCCGG CGCGCTCCAG GCCTGGGGCC TACGCTACAA TCCGGCCTGA
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| Protein sequence | MSSASRPSAS GLPEGLADDT AEAEDGSDGA ETRVVQASPA QHGARLDKAL AELVPEFSRS
YLQQLLGEGG VLVNGRAAAK PSARVQAGDV LSVELRPTPQ SQAFRPEAMA LDTVYEDEHL
RIVNKPAGLV VHPAPGNWSG TLLNGLLALD PRAGNVPRAG IVHRLDKDTS GLMVVARERS
VMDALVRMIA AREVSRQYLA LGHRAWQGAQ TRVVEEAIGR DPRNRLRMAA VDLAVHAGKP
ARTDIAVLDT CENGCLVHCT LHTGRTHQIR VHMAWLRHPL VADALYGGEP AAGLSRQALH
AYRLAFAHPV TGQPLLFHAP LPGDMAGALQ AWGLRYNPA
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