Gene Aave_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1399 
Symbol 
ID4666377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1534373 
End bp1535185 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID639822593 
Producttransposase, IS4 family protein 
Protein accessionYP_969764 
Protein GI120610086 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.878322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA AGCCCTACCC GACGGATGTC AGCGATGAAG AATGGAGCTT CGCTGCGCCC 
TACTTGAGCC TGATGGACCA GCGCGCGCCC CAGCGCGAGC ACGATCTGCG CGAAGTCTTC
AACGCCCTGC GCTGGCTGGT GCGCGCAGGC GCGCCTTGGC GGATGCTGCC CAACGATCTA
CCTCCTTGGG AGGCGGTCTA CCAGCAAACC CGACGCTGGC TGGAAGCGGG CTGCTTCGAG
GCGATGGTGT CGGACCTGCG CTCGATCATC CGCGTGGCGC AAGGGCGCCA GGGACAACCC
AGTGCCATGG TGATGGATGG GCGGACATTG CAGTCGAGCT GCGAGAGCGG ACCGCGTGCG
GGTTACGACG GCTACAAGCG CAAGCGGGGC AGCAAGGTTC ACATGGCAGT GGACACCCTG
GGGCACCTGC TGGCGGTGCA TGTTACGCCG GCCAATGAAC AGGAAAGGGC ACAGGTGCAG
CGTCTGTGCG GAGACGTACA GCAGGCCACG GGCCACTCGG TGAAGCTGGG CTGGGCGGAC
CAGGGCTATA CGGGCGAGGT GGCAGCAGAG GCTGCAAGGG ACAACGGCAT CGATCTGCAG
ATCGTGAAGC TGCCCGAAGC GAAAAAGGGC TTCGTGCTGC TGCCCCGGCG CTGGGTGGTA
GAGCGCAGCT TCGGGTGGCT GGCGAGATTC CGCAGACTCA CGCGGGACTA CGAGCGCCTA
CCCGAAGTGC TCGGCGGGCT GCATTTCCTG GTCTTTGCCG TGCTCATGTT GCCTGCAGCC
GCACGGGTGC TGGCTGCGGC GGGAAGTTCA TAA
 
Protein sequence
MPRKPYPTDV SDEEWSFAAP YLSLMDQRAP QREHDLREVF NALRWLVRAG APWRMLPNDL 
PPWEAVYQQT RRWLEAGCFE AMVSDLRSII RVAQGRQGQP SAMVMDGRTL QSSCESGPRA
GYDGYKRKRG SKVHMAVDTL GHLLAVHVTP ANEQERAQVQ RLCGDVQQAT GHSVKLGWAD
QGYTGEVAAE AARDNGIDLQ IVKLPEAKKG FVLLPRRWVV ERSFGWLARF RRLTRDYERL
PEVLGGLHFL VFAVLMLPAA ARVLAAAGSS