| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1379 |
|---|
| Symbol | |
|---|
| ID | 4666962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1512242 |
|---|
| End bp | 1513174 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639822573 |
|---|
| Product | restriction endonuclease |
|---|
| Protein accession | YP_969744 |
|---|
| Protein GI | 120610066 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1787] Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.732895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAA AAAGAGGGAA GACATCCGTC CTCGAGGACC TGATGGAACT GGTGGCATTG
CTGCCCTGGT GGGTGGGCGT GCTGCTCGCG GTCCTGGGCT ACGTGGTGCT GAACCGGCTG
GCCAACGCCC CGCTGCCGGT GGCGAGCACG CCCCAGGACA TCGCGCACAT GGCCACCCAC
AGCATCTGGC GAGGGTTGGC CTACGCCGGG CAGTTCATCG TGCCGCTCAT CTGCGCCATG
GGCGCCCTGG CTTCCGCCGT GCGCCGGCGC GAGCGCCGCC GGCTGATCGA CACCGCATGC
CGCAGCACGG CGGCCGACGC GCTGCACGGC ATGGACTGGC AGGAATTCGA AAGGCTCGTG
GGCGAAGGCT TCCGGCGGCA GGGCTACCTG GTGGCGGAAA CGGGTGGCGG CGGCGCGGAC
GGGGGTGTCG ATCTCGTGCT CGGCAAGGCC GGCGAGAAGT TTCTCGTGCA GTGCAAGCAA
TGGAAGGCGT TCAAGGTCGG CGTCACCGTG GTGCGCGAGC TGTACGGCGT CATGGCCGCC
CGCGGCGCCG CGGGCGGCTT CGTCGTGACG TCGGGCAGCT TCACCCGGGA GGCCACGGAA
TTCGCCAGCG GGCGCAACAT CCAGCTGATC GACGGCGCTG CGCTGCTGCG GCTGATACGG
CAGGGGCGGT CTGCGCCGGA GCCACGGGCA CAGTCTCAGC CACAGGCGCG TACGCAGGCC
CGGCCCACGG AGCAGCCGGC GGGCGATGGC CCCGCGCCCG ACCCCGATCC GGCCCCCGAC
CCCGATCTGG CCCCCGAGGC CGAGGCGCCG CCCAGTTGCC CCGTCTGTGC GCAGCCGATG
GTGCGCCGGG TCGCCCGGCG CGGGGCTTCG GCGGGGCAGG GGTTCTGGGG ATGCTCGGGC
TATCCGCGCT GCAGGGGTAC GCGGCCCCTG TGA
|
|---|
| Protein sequence | MARKRGKTSV LEDLMELVAL LPWWVGVLLA VLGYVVLNRL ANAPLPVAST PQDIAHMATH
SIWRGLAYAG QFIVPLICAM GALASAVRRR ERRRLIDTAC RSTAADALHG MDWQEFERLV
GEGFRRQGYL VAETGGGGAD GGVDLVLGKA GEKFLVQCKQ WKAFKVGVTV VRELYGVMAA
RGAAGGFVVT SGSFTREATE FASGRNIQLI DGAALLRLIR QGRSAPEPRA QSQPQARTQA
RPTEQPAGDG PAPDPDPAPD PDLAPEAEAP PSCPVCAQPM VRRVARRGAS AGQGFWGCSG
YPRCRGTRPL
|
|---|
| |