| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1341 |
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| Symbol | |
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| ID | 4667390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1466947 |
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| End bp | 1467792 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822535 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_969706 |
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| Protein GI | 120610028 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0557803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.620551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGT GGCGCGTGGC GGATGGCACG GCGGTGGTCC GGCTGCGGCA GCAGCTGGCG
GCGGGAGCGC GGATGGCCGC GCTGGGGCTC GCCCTGTGGC TGCCGCTGCA ATCCGCCCAT
GCGGATCTCT GGGCCTACGT GGACGAGCGC GGCGTGACGC ATTTCGCGGC CGAGCGCATC
GACGAGCGCT ACAGCCTGTT CTTCCGCGGC GACGTGTTCG ACTCCACCAG GGACGGACGC
TCCGCGGGCA CGGGCCTCGT GCCGCCCGGC ATGGCGCCGG GGGCCACGCC GGAGGGCGCG
CGGCGCCTGG CCTATTTCGA CATCGCGCCC GAGGTCAAGC GCGTGAAGCA TTTCCTGCGC
GCCTCGGCGA ACCGCCACGG GCTCGACTAC GAACTGCTGC AGGCCGTGAT CGCGACCGAA
TCGGGGTTCG ATCCGCAGGC GGTGTCGCCG CGCGGCGCGG TGGGGCTCAT GCAGGTGATG
CCGGCCACGG CCGAACGCTT CGGCGTGGCG CGCGAGGCCA GGCGTTCGGT GGAGCAGAAG
CTCACCGATC CGGGCACGAA CATCGCGGCC GGCGCGCGCT ACCTGAGGCA CCTGATCGAT
CTTTTCGAGG GCCGGCTGGA CCTGGCCCTG GCGGCCTACA ACGCGGGCGA GGGCGCCGTG
CAGCGCGCCG GCCGCCGCAT TCCCGCCTAC CGCGAGACGC AGAACTACGT GAAGAGCGTG
CTGGGGCTCT ACGCCCTGCT CAAGCCCGCG GCGGTCGCCC CGGTGCCCGT GGCGGCGGGG
CGCGGCGCCG CGGCCGGCCG GGTGCGCATG GAGCTGGCGG CGCCCGTGGT CCAGGGCGCG
CCCTGA
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| Protein sequence | MAAWRVADGT AVVRLRQQLA AGARMAALGL ALWLPLQSAH ADLWAYVDER GVTHFAAERI
DERYSLFFRG DVFDSTRDGR SAGTGLVPPG MAPGATPEGA RRLAYFDIAP EVKRVKHFLR
ASANRHGLDY ELLQAVIATE SGFDPQAVSP RGAVGLMQVM PATAERFGVA REARRSVEQK
LTDPGTNIAA GARYLRHLID LFEGRLDLAL AAYNAGEGAV QRAGRRIPAY RETQNYVKSV
LGLYALLKPA AVAPVPVAAG RGAAAGRVRM ELAAPVVQGA P
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