| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1339 |
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| Symbol | |
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| ID | 4668942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1463598 |
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| End bp | 1464836 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822533 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_969704 |
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| Protein GI | 120610026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.627078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG AAAACCCGAA GCTCTCCATG GCGCAGGTCC TGGCCTGCGG CGCGGCCGTC
GTCACGCTCT CCATGGGCAT ACGCCACGGC TTCGGCCTGT GGCTGCAGCC GATCACGCAG
GACATGGGCT GGACCCGCCA GACCTTCGCG CTCGCGCTCG CCGTGCAGAA CATCGCCTGG
GGCCTGTTCG GCATCTTCGC GGGCATGGCG GCCGACCGCT TCGGAGCGTT CCGCGTGCTG
ATCGCCGGGG CGGTGCTGTA TGCCTTCGGG CTGGCCGGCA TGGCGCTGTC GCCCACGCCC
CTGCTGTTCG CCCTCACGGC CGGCGTGCTG ATCGGCGCGG CCCAGGCGGG CACCACCTAT
GCCGTGATCT ACGGCGTGCT GGGCCGCCAG ATCGCGCCCG AGAAGCGCTC CTGGGCCATG
GGCGTGGCCG CGGCCGCCGG CTCGTTCGGG CAGTTCCTGA TGGTGCCCGT CGAGGGCCAG
TTGATCGCCC GCCTGGGATG GCAGGAATCG CTGCTCGCCC TCTCGGCCAT GGTGCTGCTC
ATCGTGCCGC TGGCCTTCGG CCTGCGCGAG CCGGGCTTCG GCCGCCGGGC GGCAGGCGCC
CCCGCCGCGC CGCGCAGCCA GACGGTGGGA GAGGCCCTGT CCGAAGCGCT GCGCTATCCC
AGCTTCCTGC TGCTCACGGC CGGGTACTTC GTGTGCGGGT TCCAGGTGGT GTTCATCGGC
GTGCACATGC CCAGCTACCT CAAGGACCAC GGCCTCTCGC CCCAGGTGGC GAGCTACGCG
CTGGCCCTGA TCGGCCTCTT CAACGTCTTC GGCACCTACA TCGCCGGCAC CCTCGGCCAG
CGCATGGCGC GCCGGCACAT CCTGGCCTTC ATCTATTTCG CCCGCGCCGT GGCGATCACC
GTGTTCCTGC TCGCGCCGCT CACCCCCGTC TCGGTGTACG TGTTTTCCGC GGTCATCGGG
TTCCTGTGGC TGTCCACCGT GCCGCCCACC AACGCCACGG TGGCACAGAT CTTCGGTGTG
CAGCACCTCT CGATGCTGGG CGGGTTCGTG TTCTTCAGCC ACCAGATCGG CAGCTTCCTG
GGCGTCTGGC TGGGCGGCTA CCTCTACGAC CGCACTGGCA GCTACGACGT GGTCTGGTAC
CTCGCCATCG CCTTGGGGCT GGTGGCCGGC CTCATCAACC TGCCGGTGCG CGAAACGCCG
ATCACGCGCG CCCCGGTCCG GACGGGCGCC GCCGCCTGA
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| Protein sequence | MSSENPKLSM AQVLACGAAV VTLSMGIRHG FGLWLQPITQ DMGWTRQTFA LALAVQNIAW
GLFGIFAGMA ADRFGAFRVL IAGAVLYAFG LAGMALSPTP LLFALTAGVL IGAAQAGTTY
AVIYGVLGRQ IAPEKRSWAM GVAAAAGSFG QFLMVPVEGQ LIARLGWQES LLALSAMVLL
IVPLAFGLRE PGFGRRAAGA PAAPRSQTVG EALSEALRYP SFLLLTAGYF VCGFQVVFIG
VHMPSYLKDH GLSPQVASYA LALIGLFNVF GTYIAGTLGQ RMARRHILAF IYFARAVAIT
VFLLAPLTPV SVYVFSAVIG FLWLSTVPPT NATVAQIFGV QHLSMLGGFV FFSHQIGSFL
GVWLGGYLYD RTGSYDVVWY LAIALGLVAG LINLPVRETP ITRAPVRTGA AA
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