Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1335 |
Symbol | |
ID | 4665371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1459840 |
End bp | 1460616 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822529 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_969700 |
Protein GI | 120610022 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGCGCT TCAAGAACCT GGGCAGCGGC AGCTCGGGCA ACGCCACCGT CGTCGAAGGG CGCTGCGGCA CGCAGGTACG GCGCCTGCTC GTCGATTGCG GACTGGGGCC GCGCCAGCTG GCCGGCCGGC TCGGCGAGGC CGGCCTCGCG ATCGACGACA TCGACGCGAT CTTCATCACG CACGAGCATT CCGACCACGT GGGCGGCCTG CAGAAGGTCG CCCTGCGCCA CCGCATTCCG GCCTGGATGA GCCACGGTAC CTACACGGCC ATCGGCGCGC CGGACCTGGA CGGGTTGCTG CACCTCACTG CGGACGGCGA ATCCATCGAT CTGGGTGCTT TCGAGGCACG CCCCTTCACC GTGCCGCACG ATGCGCGCGA GCCGCTGCAC CTGCGCTGCA GCGACGGAGC CACCCACATC GGGCTGCTGA CGGACCTGGG CCACGCCACC GAGCACGTGC TCGCCCATCT GCGCGGCTGC CATGCGCTGC TGCTGGAGAG CAACCACGAC CGCGAGATGC TCTCCGTCTC CAGCTACCCC GCCTTCCTGA AGCGGCGCAT CGGCGGCGCC TATGGCCATC TTGGCAACCA CGTGGCGGCG GAGATCCTGC GCGCCGTACG GCACGACGGC CTGCGCAGCG TGGCAGCGGC CCACCTCAGT GCCCAGAACA ACCGCCCGGA CCTCGCCCGC GCTGCGCTCG CCGAAGCCAT CGGCTGGGAG CCGGCCCGGA TCGAGGTGGC GGACCCGCGC AGCGGCACCG GCTGGATCGG CGGGTGA
|
Protein sequence | MLRFKNLGSG SSGNATVVEG RCGTQVRRLL VDCGLGPRQL AGRLGEAGLA IDDIDAIFIT HEHSDHVGGL QKVALRHRIP AWMSHGTYTA IGAPDLDGLL HLTADGESID LGAFEARPFT VPHDAREPLH LRCSDGATHI GLLTDLGHAT EHVLAHLRGC HALLLESNHD REMLSVSSYP AFLKRRIGGA YGHLGNHVAA EILRAVRHDG LRSVAAAHLS AQNNRPDLAR AALAEAIGWE PARIEVADPR SGTGWIGG
|
| |