Gene Aave_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1335 
Symbol 
ID4665371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1459840 
End bp1460616 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID639822529 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_969700 
Protein GI120610022 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGCT TCAAGAACCT GGGCAGCGGC AGCTCGGGCA ACGCCACCGT CGTCGAAGGG 
CGCTGCGGCA CGCAGGTACG GCGCCTGCTC GTCGATTGCG GACTGGGGCC GCGCCAGCTG
GCCGGCCGGC TCGGCGAGGC CGGCCTCGCG ATCGACGACA TCGACGCGAT CTTCATCACG
CACGAGCATT CCGACCACGT GGGCGGCCTG CAGAAGGTCG CCCTGCGCCA CCGCATTCCG
GCCTGGATGA GCCACGGTAC CTACACGGCC ATCGGCGCGC CGGACCTGGA CGGGTTGCTG
CACCTCACTG CGGACGGCGA ATCCATCGAT CTGGGTGCTT TCGAGGCACG CCCCTTCACC
GTGCCGCACG ATGCGCGCGA GCCGCTGCAC CTGCGCTGCA GCGACGGAGC CACCCACATC
GGGCTGCTGA CGGACCTGGG CCACGCCACC GAGCACGTGC TCGCCCATCT GCGCGGCTGC
CATGCGCTGC TGCTGGAGAG CAACCACGAC CGCGAGATGC TCTCCGTCTC CAGCTACCCC
GCCTTCCTGA AGCGGCGCAT CGGCGGCGCC TATGGCCATC TTGGCAACCA CGTGGCGGCG
GAGATCCTGC GCGCCGTACG GCACGACGGC CTGCGCAGCG TGGCAGCGGC CCACCTCAGT
GCCCAGAACA ACCGCCCGGA CCTCGCCCGC GCTGCGCTCG CCGAAGCCAT CGGCTGGGAG
CCGGCCCGGA TCGAGGTGGC GGACCCGCGC AGCGGCACCG GCTGGATCGG CGGGTGA
 
Protein sequence
MLRFKNLGSG SSGNATVVEG RCGTQVRRLL VDCGLGPRQL AGRLGEAGLA IDDIDAIFIT 
HEHSDHVGGL QKVALRHRIP AWMSHGTYTA IGAPDLDGLL HLTADGESID LGAFEARPFT
VPHDAREPLH LRCSDGATHI GLLTDLGHAT EHVLAHLRGC HALLLESNHD REMLSVSSYP
AFLKRRIGGA YGHLGNHVAA EILRAVRHDG LRSVAAAHLS AQNNRPDLAR AALAEAIGWE
PARIEVADPR SGTGWIGG