Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1315 |
Symbol | |
ID | 4669642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1442339 |
End bp | 1443688 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639822509 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_969680 |
Protein GI | 120610002 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGGT GGCGACCTGC CAAGGGCCCA CCCGCCCGGT CATCCATTCT CCTCACGCCC ATGTCGAGCA ATAACGAAAA CGCACCCGCT TTCGAGTCCA CCCAGCCCCA GGAAGGCGCG GCGATGGACG AGGCCAACCT CGCCATCATC GCGCGCCAGG CCATCGTGGA CGAGCACCGC GCCGTCTTCG GCTACGAGCT CTTCGACCGC TCCACCGCCT CCGACGCGCA CACGGCCGCC AGCGATGCCG CCCTGCTCTT CAATGCGCTC TCATACGCGG GCACCGAGGC CCTGGTGGGC AAGAAGACGG TGTTCATCAA CTGCACCCAT GAGAGCCTCG CGGGCGGCCA CCTGGAGCTC ATCCATCCCG AGAAGGTCGT GCTGGAGGTT CCCACGCTGC CGGACACGGC CGGCGTGGAG GAGATCGAAG GCCGCCTGTC CACCCTCGAA GGGCTGCGGG CCCGGGGCTT TCGCCTCGCC TTCAACCAGA ACGTGCTGCG CCGCAACTAC GGCAGCTGGC TGCGGATGGC CGCTTTCGTG AAGCTCGACA TGCAGGCCTT CCGGCCCGAA CTGGCCGAGC CGCTCGTGAA GTTCGCACGT GCCAACAGCC AAGCCACGCT GGTCGCCGAG AAAGTGGAAA CCGCCGAGCA GCACGAGCGC ATGGCCGCGC TGGGCGTGAA GCTGTTCCAG GGTTTCTGGT TCGCCAAGCC CGCACTCGTC AAGGCCCAGA CCATACGGCC GTCGCAGGCC ACGATCATCC AGCTCATCAA CCTGGTGCGC AAACAGGCGA GCACCGCGGA AATCGAAGAC CTGCTCAAGA AGGACCCCAC GCTGTCCTTC AACCTGCTGC GCTTCATCAA CTCCTCCGGC TTCGGACTGT CCTGCGAGAT CACCTCGTTC CGGCATGCGG TCATGATCCT CGGCCTCAAG AAGCTCTTCC GCTGGGCGGC GCTGCTGATG ACCACTTCGC GCGCGGGCGG CTCGCCGCCG GCCGTGGGCC AGACGGCCGT CGTGCGCGGG CGCCTGATGG AACTGCTGGC CGCCGAACTG CTGCCACCCG AAGAGTGCGA CAACGCCTTC GTGGTGGGCG TGTTCTCGCT GCTGGACACC ATGCTCGGCG TGCCGCTGGA AAAGGCCCTC GAATCGGTGG CCCTGCCGCA GCCGGTGATC GATGCGCTGC TGCACAACAC CGGCGTGTTC GCGCCGTTCC TCGACCTCAC CAAGGCCTGC GAAAGCGGTG ACGAAGTGGC GTTCGCCAAG GCCGCCGAGG CGCTGCACCT CTCGAACCGT CAGGTCAACT GGGCCCACCT GCAGGCCCTG ACCTGGGCCG AAAGCCTGGG CGAAGGCTGA
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Protein sequence | MVRWRPAKGP PARSSILLTP MSSNNENAPA FESTQPQEGA AMDEANLAII ARQAIVDEHR AVFGYELFDR STASDAHTAA SDAALLFNAL SYAGTEALVG KKTVFINCTH ESLAGGHLEL IHPEKVVLEV PTLPDTAGVE EIEGRLSTLE GLRARGFRLA FNQNVLRRNY GSWLRMAAFV KLDMQAFRPE LAEPLVKFAR ANSQATLVAE KVETAEQHER MAALGVKLFQ GFWFAKPALV KAQTIRPSQA TIIQLINLVR KQASTAEIED LLKKDPTLSF NLLRFINSSG FGLSCEITSF RHAVMILGLK KLFRWAALLM TTSRAGGSPP AVGQTAVVRG RLMELLAAEL LPPEECDNAF VVGVFSLLDT MLGVPLEKAL ESVALPQPVI DALLHNTGVF APFLDLTKAC ESGDEVAFAK AAEALHLSNR QVNWAHLQAL TWAESLGEG
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