| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1270 |
|---|
| Symbol | |
|---|
| ID | 4668624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1394747 |
|---|
| End bp | 1395823 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639822464 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_969635 |
|---|
| Protein GI | 120609957 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0577463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.231678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CGCTCTACAA CGGCGGGCTG AACCTCGTCG CGCAGTCCTG GTGGACGGGC
GCCGTGTGGC CCGTGCTCTG GAACCTGCTC AAGATCGTCG CCATCGTGGC GCCGCTCATG
GGCGCGGTGG CCTACCTCAC GCTCTGGGAG CGCAAGCTGC TGGGCTTCAT GCAGGTGCGC
CACGGCCCCA ACCGCGTGGG CCCGTTCGGG CTGCTGCAGC CGCTGGCCGA CGGCCTGAAG
CTGCTCACCA AGGAAATCAT CCAGCCCGCG GCGGCCAGCA AGGGCCTGTT CGTGCTGGGC
CCGGTGATGG CCATCATGCC CGCGCTCGCG GCCTGGGTGG CGATCCCCTT CGGTCCCGAC
GTGGCGCTGG CCAACGTGAA CGCCGGCCTG CTGCTGATCA TGGCGATCAC CTCGATCGAG
GTGTACGGCG TGATCATCGC CGGCTGGGCC TCGAACTCGA AGTACGCTTT CCTGGGCGCG
CTGCGCGCAT CGGCCCAGAT GGTGAGCTAC GAGATCGCCA TGGGCTTCTG CTTCCTCGTG
GTCATCATGG TCTCGGGCAG CATGAACCTC ACGCAGATCG TGCTGAGCCA GGCGCAGGGC
ACGATGGCGA ACGCCGGGCT GTCGTTCCTG TCCTGGAACT GGCTGCCGCT GCTGCCGATC
TTCATCGTCT ATCTGATCTC CGGCGTCGCC GAAACCAACC GCCATCCGTT CGACGTGGTG
GAAGGCGAGG CGGAAATCGT GGCCGGCCAC ATGGTCGAGT ACTCGGGCAT GGGCTTCGCG
ATCTTCTTCC TGGCCGAATA CGCCAGCATG TGGCTCGTGT CCATCCTGGG CGTGACCATG
TTTCTGGGCG GCTGGCTGTC GCCGGTGGCG GCCCTGGACT TCATCCCGGG CTGGATCTGG
CTGGGCCTCA AGACCTTCCT CGTGGTGTCC ATGTTCATCT GGATCCGCGC GACCTTCCCG
CGCTTCCGGT ACGACCAGAT CATGCGCCTG GGCTGGAAGA TCTTCATTCC GGTCACCCTG
GTGTGGCTGC TGATCGTGGG CGGATGGCTG CTGTCGCCCT GGAACATCTG GAAATAA
|
|---|
| Protein sequence | MIDALYNGGL NLVAQSWWTG AVWPVLWNLL KIVAIVAPLM GAVAYLTLWE RKLLGFMQVR
HGPNRVGPFG LLQPLADGLK LLTKEIIQPA AASKGLFVLG PVMAIMPALA AWVAIPFGPD
VALANVNAGL LLIMAITSIE VYGVIIAGWA SNSKYAFLGA LRASAQMVSY EIAMGFCFLV
VIMVSGSMNL TQIVLSQAQG TMANAGLSFL SWNWLPLLPI FIVYLISGVA ETNRHPFDVV
EGEAEIVAGH MVEYSGMGFA IFFLAEYASM WLVSILGVTM FLGGWLSPVA ALDFIPGWIW
LGLKTFLVVS MFIWIRATFP RFRYDQIMRL GWKIFIPVTL VWLLIVGGWL LSPWNIWK
|
|---|
| |