Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1221 |
Symbol | |
ID | 4665120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1345758 |
End bp | 1346831 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822414 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_969586 |
Protein GI | 120609908 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.725495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0144759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CAGTCCTGCC CGGCGACGGC ATCGGCCCCG AAATCGTGGC CGAGGCCGTG AAGGTGCTCG AAACGCTCGA CCTTCCCTTC GAGATGGAAT CCGCCCTGGT CGGCGGCGCG GCCTACGAGG CCCACGGCCA CCCCCTGCCC GAGTCCACGC TGACGCTCGC CCGGGAAGCC GATGCCGTGC TGTTCGGCGC CGTGGGCGAC TGGAAGTACG ACAAGCTCGA CCGCCCGCTG CGTCCCGAGC AGGCCATCCT GGGCCTGCGC AAGAACCTCG GCCTGTTCGC CAACTTCCGC CCGGCGATCT GCTACGAGCA GCTCACGCAC GCCTCCAGCC TCAAGCCCGA ACTCGTCGCG GGCCTGGACA TCCTCATCAT CCGGGAGCTG ACGGGCGACA TCTACTTCGG CCAGCCGCGC GGCCGCCGCA CGGCCACCGA CGGGCATTTC CCCGGCGCCG AGGAAGCCTT CGACACCATG CGCTACAGCC GCCCGGAGAT CGAGCGCATC GCGCACGTCG CCTTCCAGGC CGCGCGCAAG CGCAGCAGGA AGGTCACGAG CGTGGACAAG GCCAACGTGC TGGAAACCTT CCAGTTCTGG AAGGACGTGG TCACCGACGT GCACAAGGAA TACCCCGACG TGGAGCTGGA GCACATGTAC GTGGACAACG CCGCCATGCA GCTGGTGAAG AAGCCCAAGG CCTTCGACGT GGTGGTGACG GGCAACATGT TCGGCGACAT TCTTTCGGAC GAGGCCTCCA TGCTCACGGG TTCCATCGGC ATGCTGCCTT CGGCCAGCCT GAACAGCAGG AACCAGGGCC TGTACGAGCC CAGCCACGGC AGCGCGCCCG ACATCGCCGG CCAGGGCATC GCCAACCCGC TGGCCACCAT CCTGTCGGCC GCCATGATGC TGCGCTTCAG CCTGAACCAG GAAGCCGCCG CCCAGCGCAT CGAAGCCGCC GTGCAGAACG TGCTGGCCCA GGGCCTGCGC ACGCCCGACA TCTGGAGCGA GGGCACGACC AAGGTCGGCA CGGCGCAGAT GGGCGATGCG GTGGTGAAGG CCCTGGCGCG CTGA
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Protein sequence | MKIAVLPGDG IGPEIVAEAV KVLETLDLPF EMESALVGGA AYEAHGHPLP ESTLTLAREA DAVLFGAVGD WKYDKLDRPL RPEQAILGLR KNLGLFANFR PAICYEQLTH ASSLKPELVA GLDILIIREL TGDIYFGQPR GRRTATDGHF PGAEEAFDTM RYSRPEIERI AHVAFQAARK RSRKVTSVDK ANVLETFQFW KDVVTDVHKE YPDVELEHMY VDNAAMQLVK KPKAFDVVVT GNMFGDILSD EASMLTGSIG MLPSASLNSR NQGLYEPSHG SAPDIAGQGI ANPLATILSA AMMLRFSLNQ EAAAQRIEAA VQNVLAQGLR TPDIWSEGTT KVGTAQMGDA VVKALAR
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