| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1214 |
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| Symbol | trpA |
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| ID | 4665408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1336459 |
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| End bp | 1337316 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822407 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_969579 |
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| Protein GI | 120609901 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0210268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG ACATGACGAC TTCCGCGTCC ACGGCACCGC TGGCCGCCCA GGGGCGCATC
GCGGCGACGT TCGCCGACCT GCAGGCCCGC GGCCGCAAGG CCCTCATTCC CTACGTGACC
GCCGGCTTCC CGTTCGCGGA CATCACGCCC GCGCTGATGC ACGGCATGGT GGAGGCCGGC
GCCGATGTGA TCGAACTCGG CGTGCCGTTC TCCGATCCCA TGGCCGACGG CCCGGTGATC
CAGAAGGCCG GGGAGAAGGC CCTCTCCCTG GGCGTGGGCA TGGCCCAGGT GCTCGGCTAT
GTGCGCGAGT TCCGCCAGCG CAACACGAAG ACCCCGGTGG TGCTCATGGG CTACGCCAAC
CCGGTGGAAC GCTACGACCA GCGCCACGGA GACAACGCCT TCGTGCGCGA TGCGGCCGAG
GCCGGCGTGG ACGGGGTACT GATCGTGGAT TACCCTCCCG AAGAGTGCGA GGACTTCGCA
GCCCGGCTGC GCGCGCATGG CATGGACCTG ATCTTCCTGC TGGCGCCCAC CAGCACGGAG
CAGCGCATGC AGCAGGTGGC GCGCGTCGCG AGCGGCTACG TGTACTACGT TTCGCTCAAG
GGCGTGACCG GCTCGGGCGC CCTCGATACT TCGGCCGTGG AAGCCATGCT GCCGGTGATC
CGCCGCCATG TGCACATCCC CGTCGGCGTG GGTTTCGGCA TCCGCGATGC GGCCACCGCG
CAGGCCATCG GCCGTGTCGC GGATGCCGTG GTGATCGGCA GCCGCATCAT CCAACTGCTG
GAAGACCAGC CCCACGAGCG GGTCGTGCCC CTGGCCGTGG ACTTCCTGCG GGGGGTGCGC
AAGGCGCTCG ACACGTAG
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| Protein sequence | MSADMTTSAS TAPLAAQGRI AATFADLQAR GRKALIPYVT AGFPFADITP ALMHGMVEAG
ADVIELGVPF SDPMADGPVI QKAGEKALSL GVGMAQVLGY VREFRQRNTK TPVVLMGYAN
PVERYDQRHG DNAFVRDAAE AGVDGVLIVD YPPEECEDFA ARLRAHGMDL IFLLAPTSTE
QRMQQVARVA SGYVYYVSLK GVTGSGALDT SAVEAMLPVI RRHVHIPVGV GFGIRDAATA
QAIGRVADAV VIGSRIIQLL EDQPHERVVP LAVDFLRGVR KALDT
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