| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1213 |
|---|
| Symbol | |
|---|
| ID | 4665383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1335409 |
|---|
| End bp | 1336281 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639822406 |
|---|
| Product | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha |
|---|
| Protein accession | YP_969578 |
|---|
| Protein GI | 120609900 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.020251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTGGC TCGAAAAACT CCTGCCGTCC AAGATCCAGC AGTCCGACCC GACGGAGCGC
CGCCAGGTGC CCGAGGGGCT GTGGATCAAG TGCCCGAGCT GCGAGACCGT GCTCTACAAG
ACCGACCTGG AGCACAACCA GAACGTCTGC CCGCATTGCA GCCACCACCA CCGCATCAAT
GCCCGCGCGC GCCTCGACGC CTTCCTGGAC GCGGAAGGCC GCTACGAGAT CGGCCAGGAA
GTGCTGCCGG TGGACGCGCT CAAGTTCAAG GACAGCCGCA AGTACACCGA ACGCCTGAAG
GAAGCGCTGG AAAATACCGG CGAGACCGAC GCGCTGATCG TGATGGGCGG CTCGGTCAAG
AGCATCAACG TCGTCGCGGC CTGCTTCGAG TTCGATTTCA TGGGCGGCTC CATGGGCAGT
GTGGTGGGCG AGCGCTTCGT GCGCGGCGTG GAAACCGCCA TCGAGCAGAA GGTGCCGTTC
ATCTGCTTCA CCGCCACCGG CGGCGCGCGC ATGCAGGAAG GCCTGCTGTC GCTCATGCAG
ATGGCCAAGA CCAATGCTGC GCTCACCCGG CTGGCCAAGA AAGGCCTGCC CTACATCAGC
GTGCTGACCG ACCCGACCAT GGGCGGAGTC TCCGCCGGCT TCGCCTTCGT GGGCGACATC
GTGATCGCCG AGCCCAAGGC GCTCATCGGC TTCGCGGGCC CGCGCGTGAT CGAATCCACC
GTGCGCGTGA CGTTGCCGGA AGGCTTCCAG CGGGCCGAGT TCCTGCAGAC CAAGGGCGCC
GTGGACTTCA TCTGCGACCG CCGCGAACTG CGCGACACCG TGGCCAGGAG CCTGGCCATG
CTCCAGCGCC TGCCGGCCGA CTCGGTCGCC TGA
|
|---|
| Protein sequence | MSWLEKLLPS KIQQSDPTER RQVPEGLWIK CPSCETVLYK TDLEHNQNVC PHCSHHHRIN
ARARLDAFLD AEGRYEIGQE VLPVDALKFK DSRKYTERLK EALENTGETD ALIVMGGSVK
SINVVAACFE FDFMGGSMGS VVGERFVRGV ETAIEQKVPF ICFTATGGAR MQEGLLSLMQ
MAKTNAALTR LAKKGLPYIS VLTDPTMGGV SAGFAFVGDI VIAEPKALIG FAGPRVIEST
VRVTLPEGFQ RAEFLQTKGA VDFICDRREL RDTVARSLAM LQRLPADSVA
|
|---|
| |