Gene Aave_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1199 
Symbol 
ID4669078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1319457 
End bp1320233 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID639822393 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_969565 
Protein GI120609887 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.39444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00461164 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCAGC ATTCCGTGCG TACTGCCCTG TCGGTGAACG TCAACAAGGT GGCCCTGGTG 
CGCAACACGC GCCACCTGGG CATTCCCAGC GTGGAGCGCG CCGCGCTGCG GTGCCTGGAG
GCGGGCGCGC AGGGCATCAC CATCCATCCG CGCCCGGACG GGCGCCACAT CCGGGCGGAC
GACGTGCCCG TGCTGGCTGC GCTGCTGCGC CAGTGGCCGG ACCGCGAGTT CAACATCGAG
GGCAATCCGT CGCAGAACCT CATGGAGTTC ATCTGCGCCG TGCGTCCGCA CCAGGCCACC
TTCGTGCCGG ACGGCGAGGA CCAGTTCACC AGCGACCACG GCTGGAGCTT TCCGCAGGAC
GCCGAGCGCC TGGCGCCCCT GGTGGCCGAA TGCCGCGGGC TGGGCGTGCG CGTGAGCCTG
TTCATGGATG CGGAGCCGGC GCAGATGGCC GCCGCGCGTG CCGTGGGAGC CGACCGCGTG
GAGCTCTACA CCGAACCCTA TGCCGCGGCC TGGGGCACGC CTGCGCAGGA GGCGCAGCTC
GTGCGCTACG CGGATGCGGC CCGGGCGGCG CTGGAGGCCG GGCTGGGCGT GAACGCCGGG
CACGATCTCA ACCGGGACAA TCTCGCGGCC TTCGTGGCAC GCGTGCCGGG CCTGATGGAG
GTGTCGATCG GGCATGCCTT CGTCGCGGAT GCGCTGGAAC TGGGCTACGC CGCCGCCGTG
CAGGCCTACC AGCGCTGCAT CGATGCCGGC ATGGCGCAGC GGCAGGCCGG CGCATGA
 
Protein sequence
MTQHSVRTAL SVNVNKVALV RNTRHLGIPS VERAALRCLE AGAQGITIHP RPDGRHIRAD 
DVPVLAALLR QWPDREFNIE GNPSQNLMEF ICAVRPHQAT FVPDGEDQFT SDHGWSFPQD
AERLAPLVAE CRGLGVRVSL FMDAEPAQMA AARAVGADRV ELYTEPYAAA WGTPAQEAQL
VRYADAARAA LEAGLGVNAG HDLNRDNLAA FVARVPGLME VSIGHAFVAD ALELGYAAAV
QAYQRCIDAG MAQRQAGA