| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1174 |
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| Symbol | |
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| ID | 4665732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1297042 |
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| End bp | 1298241 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822368 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_969540 |
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| Protein GI | 120609862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.539633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTGTTT CAATTTGTCA GCCGGGCCGG GCGGCATGCA GGCCTTCGCA GGCAACCGGC
CTGCAATCTG CGCGCACGAC GCCCGTTGGC ATCGACCTTC CTGTACGTCG TGTCGGGCCG
GGTGGACTAA ACTCCAGAAA AATCAACCAC TTACACAACG TCGCACAGGT GAAACACATT
ATAGGGGCCA AACCGGCGCC CGGCCGCCCC CCCGCCGCCT CCGAACCGGG TGCCTTGGCC
GTGCGCTGGG TCGAGGTCGA TGCCGAGTCC GCGGGGCAGC GGCTGGATAA CTTTCTGATA
CGTGAACTCA AGGGCGTGCC CAAGACGCAT GTCTACCGCA TCATCCGCAG CGGCGAGGTC
CGCATCAACA AGGGGCGGGC CGCGGCCGAC ACCCGCGTCG AGGCCGGTGA CGTGGTCCGC
GTGCCACCCG TGCGCATTTC CGACAAGGTG GCCGCAAAGG CGGAACGGCC CGCACCGGCC
AGGGAGTTTC CCCTGCTGCT GGAGGACGAG CACCTGGTTG CCCTGGACAA GCCCGCCGGC
GTGGCGGTGC ATGGCGGCAG CGGCGTGAGC TTCGGCGTCA TCGAGCAGTT GCGCCAGGCG
CGCCCGCAGG CCCGTTTCCT GGAGCTGGTG CATCGCCTGG ACCGGGAAAC CTCGGGCATC
CTGCTCGTGG CCAAGAAGCG TTCGGCGCTC ACGCACCTGC AGGACCAGTT CCGCGAGCGC
GAAACCGGCA AGACCTACCT GGCCCTCGTG TCGGGCGAGT GGCCGGAGCG CCTGAAGGTC
ATCGACGCAC CCCTGCACAA GTACCTGCAG GCCGACGGCG AGCGCCGGGT GCGTGTGACC
ACGGAAGACG ATCCCGACGG CATGCGCTCC ATCACCCTCG TGAAGGTGCG CAGCCGCGTG
CCGGCCCGGC CGGCCGAGGG GCTGCCCGCC ATGGCGCTGC TGGAGGTGAC GATCAAGACC
GGCCGCACCC ACCAGATCCG GGTCCACCTG GCCAGCCGGG GCCACCCGAT CGTGGGCGAC
GACAAGTACG GCGACTTCGA TCTGAACCGC CGCGTCCAGA AGCACGGCCT GCGCCGCATG
TTCCTGCATG CATGGCGGTT ACAGTTCAGC CACCCCGCCA GCGGCGAGCG CATCGAACTG
CATGCCGAGC TGCCGGCGGA GCTGTCCGGC TTCCTGCCCG CCGCTCCCGC TCCCACCTGA
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| Protein sequence | MGVSICQPGR AACRPSQATG LQSARTTPVG IDLPVRRVGP GGLNSRKINH LHNVAQVKHI
IGAKPAPGRP PAASEPGALA VRWVEVDAES AGQRLDNFLI RELKGVPKTH VYRIIRSGEV
RINKGRAAAD TRVEAGDVVR VPPVRISDKV AAKAERPAPA REFPLLLEDE HLVALDKPAG
VAVHGGSGVS FGVIEQLRQA RPQARFLELV HRLDRETSGI LLVAKKRSAL THLQDQFRER
ETGKTYLALV SGEWPERLKV IDAPLHKYLQ ADGERRVRVT TEDDPDGMRS ITLVKVRSRV
PARPAEGLPA MALLEVTIKT GRTHQIRVHL ASRGHPIVGD DKYGDFDLNR RVQKHGLRRM
FLHAWRLQFS HPASGERIEL HAELPAELSG FLPAAPAPT
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