| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1169 |
|---|
| Symbol | |
|---|
| ID | 4665276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1289902 |
|---|
| End bp | 1290753 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822363 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969535 |
|---|
| Protein GI | 120609857 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.617808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGA GCTATTCCCT ACCGACACCG CTCGAATATT TCGCCGCTCT CGTGCAGAGC
GACGAGCAGT TTCCGCTACT GGAAGCTGCG GCCTGCATCG CCCACGACGA GTACCCCGAA
TTCGACGTGC AGCAGTTGCT CGGCGACATG GACCAATTGC TGGCCCGGGT GCGTCGCCGG
TTGCCGGAGG ACGCATCCTC CCTGCAGCGG CTGCGGTCGC TCAACCAGTT CTTCTTCCAC
GACCTGGGCT TCGGCGGCAA CGTCAACAAC TACTACGACC CGGACAACAG CTATCTGAAC
GCCGTGCTGC GCACGCGCCG CGGCATCCCG ATCTCGCTGG CCGTGCTGTG GATGGAACTG
GCGCAGGGGC TCGGACTGCA TGCGCGGGGC ATCTCGTTTC CCGGGCATTT CATGGTCAAG
GTGCTGCTGC CGCGCGGACA GGTGGTGCTG GACCCGACCA CGGGCCAGTC CCTGTCCCGC
GAAGACCTGG CCGAGCGTCT GGAGCCGTTC CGGCGGCGCA GCGGCCTGGT GGACGATTTC
GAGGTGCCCC TGGGGCTCTA CCTGCAGGCC GCCCCGGCCC GCGAGGTCAT CGCCCGCATG
CTGCGCAACC TGAAGGAAAT CCACCGTTCC CAGCAGGATT GGGGACGCCT CGCGGCCGTG
CAGGAGCGGC TGGTGGTGCT GCTGCCCGAT GCCTGGGGCG AGTGGCGGGA CCGCGGCCTC
GCGCGGGCCG AACTGGGCCA TGCGGAAGGA GCGGTGTCGG ACCTCGAAAC CTATCTGGCC
CATGCCGAGG ATGCGCTCGA TGTCGATGCC ATCGCCGCGC GGCTCGAGCA GCTGCGGCGT
GCCGGGGACT GA
|
|---|
| Protein sequence | MPLSYSLPTP LEYFAALVQS DEQFPLLEAA ACIAHDEYPE FDVQQLLGDM DQLLARVRRR
LPEDASSLQR LRSLNQFFFH DLGFGGNVNN YYDPDNSYLN AVLRTRRGIP ISLAVLWMEL
AQGLGLHARG ISFPGHFMVK VLLPRGQVVL DPTTGQSLSR EDLAERLEPF RRRSGLVDDF
EVPLGLYLQA APAREVIARM LRNLKEIHRS QQDWGRLAAV QERLVVLLPD AWGEWRDRGL
ARAELGHAEG AVSDLETYLA HAEDALDVDA IAARLEQLRR AGD
|
|---|
| |