| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1125 |
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| Symbol | |
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| ID | 4669680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1233382 |
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| End bp | 1234407 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639822322 |
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| Product | porin |
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| Protein accession | YP_969494 |
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| Protein GI | 120609816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ACCTGATCGC GTTGAGCGCC GCGCTGCTGT GCGCCGCCGG CGCCCACGCC
CAGAGTTCGG TCCAGCTGAC CGGACTGTCG GACATCTACG TGGGCTCCAT GAAGATGGCC
GGCGATGCGG ACCGCCGCTC GGTGGTCAAC AGCGGAGGCC TGACCACCTC GTGGTTCGGC
TTCAAGGGCA CGGAAGACCT GGGCGGCGGG CTGAAGGCCA GCTTCCAGCT GACCTCCTTC
CTGCAGGTCG ACACGGGCAC GCAGGGCCGC TTCGCGAACG ACACCTTCTT CTCGCGTGAC
GCGAACGTGA GCCTGTCGGG CGATTTCGGC TCCGTGCTGC TGGGCCGCTG GATGGCCCCC
AACTTCCTGC CGTCGGTGGT GGGCAATCCG CTGGGCGATT CGTTCACGTT CTCGCCGCTG
ATCCTGCACA TGAACGTGCC CCTGTTCAAC GGCACGGGCT GGGCCGCGAC GACGCCGGCC
GACACGGGCT GGAGCAACCA GATCGTCTAC AGCACGCCGA AGATCGGCGG CTTCTCCGCG
AACATCCAGT ACCAGTTCGG CGAGCAGGCG GGCAACAACG GCCGCAAGAA CGTGGGCGCG
AATTTCTTCT ATTTCGGCGG CCCGCTGACG CTGACCGGCT TCTACGAGCG CGACCAGATC
GCCAACCCCG GCCAGGGCGC CTACCTCGGC ACCACCAGGA AGGACTGGAT GCTGCTGGGC
GCCTATGACT TCGGCATGGT CAAGCCCTTC CTGAGCTACG GCGAGGCCAA GGCCGACAAC
ACCAGCAACA AGGCCAGGAC GATGCAGATC GGCGCCTCCA TCCCCGCGGG TCCCTCGGGC
AAGGTGCTGG TGGACTGGGT GAAGACCGAA ATGACGCAGA CCGACATCGA CCGCAAGACC
TTCACGGTGG GCTACGACTA CTTCCTGTCC AAGCGCACCG ATGTCTATGC GATGCTGATG
AACGACCGCA TCACCGCGCA GGCCAAGGGC AACAGCTTCG GCGTGGGCAT CCGCCACCGC
TTCTGA
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| Protein sequence | MKKNLIALSA ALLCAAGAHA QSSVQLTGLS DIYVGSMKMA GDADRRSVVN SGGLTTSWFG
FKGTEDLGGG LKASFQLTSF LQVDTGTQGR FANDTFFSRD ANVSLSGDFG SVLLGRWMAP
NFLPSVVGNP LGDSFTFSPL ILHMNVPLFN GTGWAATTPA DTGWSNQIVY STPKIGGFSA
NIQYQFGEQA GNNGRKNVGA NFFYFGGPLT LTGFYERDQI ANPGQGAYLG TTRKDWMLLG
AYDFGMVKPF LSYGEAKADN TSNKARTMQI GASIPAGPSG KVLVDWVKTE MTQTDIDRKT
FTVGYDYFLS KRTDVYAMLM NDRITAQAKG NSFGVGIRHR F
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