Gene Aave_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1122 
Symbol 
ID4669741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1229360 
End bp1230763 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content72% 
IMG OID639822319 
Producthistidine kinase 
Protein accessionYP_969491 
Protein GI120609813 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.94341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGC GGCTGAAACT CCTGCTGCTT TCCACCCTGC CCATCCTGGT GGCCCTCGGC 
TGCGTGGCCG CGACGGCCCG GCACCAGACC CTGAAGCTGG CGCAGCAGGA GCGCGAACTG
GTGGAGACGG CCTACCTGCA CAGCAAGGAA ACCGAACTGC GCCACTACGT GCAACTGGCC
CAGAGCGCGC TCGCACGCGT CGCCGCCGAA GAGGCCGACC CCGTGCAGCG CCAGCGGCAG
GCCCTGGCCC TGCTCTCGCG CATGCAGTTC GGCAAGGACG GCTATTTCTT CGTCTATGAC
CGCGAGGGCA ACGTGCTGCT GGACGCCCGG CAGATGGGCC TGTCGGGCGT GGACCTGTGC
GATCCGGGCG ATCCGCGCAG CGAAGCGCCC GCGAACCGCA TCCTGGCCAC GGCGCGCCAG
GGCGGCGGGA TGGTGCGCTA CGACTGGCAG AAGCCCTCCT CGCAGCTCAT GGCGCCCAAG
CTGGCCTACG TGACCACCCT GCCCGGCTGG GAGTGGATCC TGGGCACGGG GCTGTACCTG
GACGACGTGC AGCAAACGCT GCGCCACATC GACCGGGCCG CGCAGGAGAA CATCGACGGC
ACGCGGCAGC GCATCTATGG CATCGCGGCC CTGTGCATCG TGCTGATCGG CCTGGCGGGG
CTGGCGCTCA ACCTGAGCGA CCACCGCGTG GCCAGCGCCA AGCTGCGCCG GCTCGCGCAG
CGGGTGGTGA GCTCGCAGGA GGAAGAGCGG GTGCGGGTGG CGCGCGAGCT GCACGACGGG
GTGGTGCAGG TGCTGGTGTC CTCGAAATTC CTGCTGGAGA CGGCGCAGGT GCAGTGGGCC
GCGCGCGCAG CCCACGCGCC GCGCGACATG CTCGACCATG GGCTGGAGCG GCTCAACGAT
GCCCTGCTGG AGATCCGGCG CGTGTCCCAC GGGCTGCGCC CCGCGCTGCT CGACGACCTC
GGGCTCGCGC CCGCGCTCGC GCTGATGGCG CAGGAGGTGG AGGAGCAGGG AGCGTTCAGC
GTGCGGTTCG TGCTGCGCGG GCCGGCCGGG CCCCTGCCCA CCAGCCACGG CACGGCGCTG
TTCCGCATTG CCCAGGAGGC GATCACCAAT GCCCGCATGC ATGCGGGAGC CAGCCAGGTG
GAGGTGGCGC TGCGCTTCAC GCGCTGGCGG GTGAGCCTGT CGGTGCGCGA CGACGGGCGC
GGCTTCGACG TGCAGCGCGT GCAGCGCGAC GGCCAGGGCG GCATCGGCCT GCGCAACATG
CGCGAGCGCA TCGAAGGACT GGGCGGCCGC TTCGCCATCG CATCGGGCCG CGGCGGCACG
CGCATCCTGG CGGTGCTCGA CCGCCGGGAC GCGCCCGCCG CCGGGCTGTC CGCCGGCATC
GAACCCTCGC AGGTGCCCGC ATGA
 
Protein sequence
MQLRLKLLLL STLPILVALG CVAATARHQT LKLAQQEREL VETAYLHSKE TELRHYVQLA 
QSALARVAAE EADPVQRQRQ ALALLSRMQF GKDGYFFVYD REGNVLLDAR QMGLSGVDLC
DPGDPRSEAP ANRILATARQ GGGMVRYDWQ KPSSQLMAPK LAYVTTLPGW EWILGTGLYL
DDVQQTLRHI DRAAQENIDG TRQRIYGIAA LCIVLIGLAG LALNLSDHRV ASAKLRRLAQ
RVVSSQEEER VRVARELHDG VVQVLVSSKF LLETAQVQWA ARAAHAPRDM LDHGLERLND
ALLEIRRVSH GLRPALLDDL GLAPALALMA QEVEEQGAFS VRFVLRGPAG PLPTSHGTAL
FRIAQEAITN ARMHAGASQV EVALRFTRWR VSLSVRDDGR GFDVQRVQRD GQGGIGLRNM
RERIEGLGGR FAIASGRGGT RILAVLDRRD APAAGLSAGI EPSQVPA