| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1120 |
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| Symbol | |
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| ID | 4668514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1226658 |
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| End bp | 1228571 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822317 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_969489 |
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| Protein GI | 120609811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAA CAACCGCTCC CGTCAATGAC AGCACGCTGC AGGCGGTGCT GGATTCTCTG
TCGTCCGCGG TGCGCGACGG CACGGGCCCG CTCGTACAGC TCATGCGTGA AGGCGGGCTC
CACTGTGTCT TCCAGCCCCT GGCCGATCTG CGCGAGGGCA ACGTCTATGC CCACGAGGCC
CTGATCCGCG GCCCGGCGGG CACGCCGCTG CACACGCCCG ACCGGCTGCT GCAGACCGCG
CTCGGGGAAG GCGTTCTGCA GGAGTTCGAG CTGCTGTGCG TGGCGATCGC CCTGCGCCAG
TGGGGGGCGT CCGGCGGCGC AGGCCGCCTG TTCGTGAACA TCAGCGCGGA TGCCCTGGTG
CGCGGGGTGG CGCTGTGCCG CGGCATGACC CTGGCGGGCG CCGCCCGCGC CGCGGGCGTG
TCGGCGGAGA ACGTGGTGCT GGAGATCACC GAGCACGAGC GCGTGGGCGA CATGGCCTCG
CTGCGCGAGG CGCTCAAGCA GGTGCACGCC TGCGGCGCCC GCATCGCGCT CGACGATTTC
GGGGACGGCC GCTCCAGCCT GCGGCTCTGG TCCGAGACGC GGCCGGACTT CGTGAAGATC
GACAAGTACT TCGTGCGCGA CATCAGCGCC CACCCCGGGA ACCTGCAGAT GCTGCAGGCC
ATCAAGGGCA TCGCCGACGT GTTCGGCACG ACCCTGATCG CCGAGGGCAT CGAGACCCAG
GACGACCTGC GGGCGCTGCG CGACCTCGAC ATTCCCTACG GCCAGGGCTA CCTGCTGGGC
CGGCCGGGGT CCGGGCCTCG CGGGCGGATC GAAGTGCCCG CCCTGGACGC CGTGCGCGAC
CGCCGCGTGG CGATCCTGCC GCACCGCGGC CAGAACGCGC GGCCGGGCAT CCTGCGCAAC
CTGCTGGTGG TGCACGCGCC CACGGCCACG GCCGAGACCA GCAACGACAC GGTGGCCGGC
TTCTTCAAGG CGCATCCCGA ACTGCACGCC CTGCCGGTGC TCGACGGCAC CCGGCCGGTG
GCGCTGATCA ACCGCCAGCA ATTCATGAAC CACTACGCGA CGCTGTACTT CCGCGAGGTG
CACGGGCGCA AGGCCTGCGC GGCCTTCGCG AACCCGGCCC CGCGCGTGGT GGAACTCGAC
TGCGACGTGG ACCAGCTCGT GGGCATCCTG ACCTCGCAGG ACCAGCGCTA CCTGAGCGAC
GGATTCATCG TCACCGACAA CGGCCGCTAC GTGGGTCTGG GCACGGGCGA ACAATTGGTG
CGCAGCGTGA CCGAGGCCCG CATCGAGGCG GCGCGGCACG CCAACCCCCT CACCTTCCTG
CCGGGCAACA TTCCCATCAG CCTGCACATG CAGCGGCTGA TCGACAGCGG CACGGAGTTC
GTGGCCTGCT ATGCCGACCT GAACCACTTC AAGCCCTTCA ACGACTACTA CGGCTACTGG
CGCGGCGACC AGATGATCCG CCTCGTGGCG CGGCTGGCCG TGGCGCACTG CGATGCGCAG
CGGGACTTCA TCGGGCACGT GGGCGGGGAC GACTTCATGC TGCTGTTCCA GAGCGGCGAC
TGGCTGCAGC GCTGCCAGCG CATCGTGCAG GACTTCGCGC GCGAGGCCTT CAATCTGTTC
GACGACGCCG CGCGCGCGGC CGGCGGCATC TGGGCGGAAG ACCGGCACGG GGTGAAACGC
TTTTTCCCCT GCACGACGCT GGCGATCGGC GCGGCGCGCG TGGTGCCGGG CACGATGCGC
CACGCCGAGG AGGTGGCCAA TGCCGCCGCG CTGGCCAAGC ACGAAGCCAA GGGCTGCGCG
AGCGGCCTGG CCTGGCGCAC GGCAGAGCAG GCCGCCCATC TGGCGCACGC TTTCGGGCAG
GCACCGCCGC GCGCCCGGCA GGGCTCCGCC GCCACGGCCG CAGCATCCGC CTGA
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| Protein sequence | MAVTTAPVND STLQAVLDSL SSAVRDGTGP LVQLMREGGL HCVFQPLADL REGNVYAHEA
LIRGPAGTPL HTPDRLLQTA LGEGVLQEFE LLCVAIALRQ WGASGGAGRL FVNISADALV
RGVALCRGMT LAGAARAAGV SAENVVLEIT EHERVGDMAS LREALKQVHA CGARIALDDF
GDGRSSLRLW SETRPDFVKI DKYFVRDISA HPGNLQMLQA IKGIADVFGT TLIAEGIETQ
DDLRALRDLD IPYGQGYLLG RPGSGPRGRI EVPALDAVRD RRVAILPHRG QNARPGILRN
LLVVHAPTAT AETSNDTVAG FFKAHPELHA LPVLDGTRPV ALINRQQFMN HYATLYFREV
HGRKACAAFA NPAPRVVELD CDVDQLVGIL TSQDQRYLSD GFIVTDNGRY VGLGTGEQLV
RSVTEARIEA ARHANPLTFL PGNIPISLHM QRLIDSGTEF VACYADLNHF KPFNDYYGYW
RGDQMIRLVA RLAVAHCDAQ RDFIGHVGGD DFMLLFQSGD WLQRCQRIVQ DFAREAFNLF
DDAARAAGGI WAEDRHGVKR FFPCTTLAIG AARVVPGTMR HAEEVANAAA LAKHEAKGCA
SGLAWRTAEQ AAHLAHAFGQ APPRARQGSA ATAAASA
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